Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	H1-2	HGNC:4716 (HGNC) 3006 (Entrez Gene) 142710 (OMIM) H1-2 (Alliance of Genome Resources)	Chr6 p22.2	Chr6:26054760-26056470 (-) GRCh38	acute lymphoblastic leukemia	P16403 (UniProt | EBI) NM_005319 (RefSeq)
mouse	H1f2	MGI:1931526 (MGI) 50708 (Entrez Gene) Gene Tree H1f2 (Alliance of Genome Resources)	Chr13 9.9 cM	Chr13:23922790-23923514 (+) GRCm39		50708 (NCBI Gene Model) P15864 (UniProt | EBI) NM_015786 (RefSeq)
rat	H1f2	RGD:1587893 (Rat Genome Database) 684681 (Entrez Gene) H1f2 (Alliance of Genome Resources)	Chr17			NP_001395696 (RefSeq) NM_001408767 (RefSeq)
zebrafish	histh1l1	ZDB-GENE-050417-145 (Zebrafish Model Organism Database) 550353 (Entrez Gene) histh1l1 (Alliance of Genome Resources)	Chr5			NP_001017660 (RefSeq) NM_001017660 (RefSeq)
	si:dkey-108k21.21	ZDB-GENE-131127-5 (Zebrafish Model Organism Database) 100332815 (Entrez Gene) si:dkey-108k21.21 (Alliance of Genome Resources)	Chr25
	zgc:110425	ZDB-GENE-050522-103 (Zebrafish Model Organism Database) 553782 (Entrez Gene) zgc:110425 (Alliance of Genome Resources)	Chr7			NP_001018582 (RefSeq) NM_001020746 (RefSeq)
	zgc:153405	ZDB-GENE-060825-170 (Zebrafish Model Organism Database) 751661 (Entrez Gene) zgc:153405 (Alliance of Genome Resources)	Chr25			NP_001038843 (RefSeq) NM_001045378 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.