Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	CCDC88C	HGNC:19967 (HGNC) 440193 (Entrez Gene) 611204 (OMIM) CCDC88C (Alliance of Genome Resources)	Chr14 q32.11-q32.12	Chr14:91271323-91417844 (-) GRCh38	hydrocephalus spinocerebellar ataxia type 40	Q9P219 (UniProt | EBI) NM_001080414 (RefSeq)
mouse	Ccdc88c	MGI:1915589 (MGI) 68339 (Entrez Gene) Gene Tree Ccdc88c (Alliance of Genome Resources)	Chr12 51.11 cM	Chr12:100877782-100995315 (-) GRCm39		ENSMUSG00000021182 (Ensembl Gene Model) ENSMUSP00000082177 (Ensembl) ENSMUST00000085096 (Ensembl)
rat	Ccdc88c	RGD:1307429 (Rat Genome Database) 362770 (Entrez Gene) Ccdc88c (Alliance of Genome Resources)	Chr6 q32			XP_343097 (RefSeq)
zebrafish	ccdc88c	ZDB-GENE-100419-3 (Zebrafish Model Organism Database) 553231 (Entrez Gene) ccdc88c (Alliance of Genome Resources)	Chr17			A0A2R8QCI3 (UniProt | EBI) NM_001423870 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.