Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes ZFYVE9
  • Mouse genes Zfyve9
  • Rat genes Zfyve9
  • Zfish genes zfyve9a,zfyve9b
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Zfyve9

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005545	1-phosphatidylinositol binding	ZFYVE9	IDA		Human	PMID:11877415
Molecular Function	GO:0005515	protein binding	ZFYVE9	IPI	UniProtKB:Q15796	Human	PMID:10615055
Molecular Function	GO:0005515	protein binding	ZFYVE9	IPI	UniProtKB:P84022	Human	PMID:12154125
Molecular Function	GO:0005515	protein binding	ZFYVE9	IPI	UniProtKB:Q9Y561	Human	PMID:12809483
Molecular Function	GO:0005515	protein binding	ZFYVE9	IPI	UniProtKB:P36873	Human	PMID:15231748
Molecular Function	GO:0005515	protein binding	ZFYVE9	IPI	UniProtKB:P62136	Human	PMID:15231748
Molecular Function	GO:0005515	protein binding	ZFYVE9	IPI	UniProtKB:P84022	Human	PMID:15231748
Molecular Function	GO:0005515	protein binding	ZFYVE9	IPI	UniProtKB:Q15796	Human	PMID:15231748
Molecular Function	GO:0005515	protein binding	ZFYVE9	IPI	UniProtKB:P08100	Human	PMID:17693260
Molecular Function	GO:0005515	protein binding	ZFYVE9	IPI	UniProtKB:Q13277	Human	PMID:17693260
Molecular Function	GO:0005515	protein binding	ZFYVE9	IPI	UniProtKB:Q15796	Human	PMID:18511908
Molecular Function	GO:0005515	protein binding	ZFYVE9	IPI	UniProtKB:P62136	Human	PMID:22321011
Molecular Function	GO:0005515	protein binding	ZFYVE9	IPI	UniProtKB:P36873	Human	PMID:24366813
Molecular Function	GO:0005515	protein binding	ZFYVE9	IPI	UniProtKB:P36873	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	ZFYVE9	IPI	UniProtKB:P84022	Human	PMID:25502805
Molecular Function	GO:0005515	protein binding	ZFYVE9	IPI	UniProtKB:P84022	Human	PMID:31515488
Molecular Function	GO:0005515	protein binding	ZFYVE9	IPI	UniProtKB:P37173	Human	PMID:9865696
Molecular Function	GO:0005515	protein binding	ZFYVE9	IPI	UniProtKB:P84022	Human	PMID:9865696
Molecular Function	GO:0005515	protein binding	ZFYVE9	IPI	UniProtKB:Q15796	Human	PMID:9865696
Molecular Function	GO:0005515	protein binding	Zfyve9	IPI	PR:Q60953	Mouse	PMID:15356634
Molecular Function	GO:0019904	protein domain specific binding	ZFYVE9	IPI	UniProtKB:Q15796	Human	PMID:15231848
Cellular Component	GO:0005829	cytosol	ZFYVE9	IDA		Human	GO_REF:0000052
Cellular Component	GO:0031901	early endosome membrane	ZFYVE9	IDA		Human	PMID:11877415
Cellular Component	GO:0005768	endosome	zfyve9a	IDA		Zfish	PMID:25706234
Cellular Component	GO:0043231	intracellular membrane-bounded organelle	ZFYVE9	IDA		Human	GO_REF:0000052
Cellular Component	GO:0032991	protein-containing complex	ZFYVE9	IMP		Human	PMID:15231848
Biological Process	GO:0048699	generation of neurons	zfyve9a	IMP	ZFIN:ZDB-MRPHLNO-150520-3,ZFIN:ZDB-MRPHLNO-150520-4	Zfish	PMID:25706234
Biological Process	GO:0072574	hepatocyte proliferation	zfyve9a	IMP	ZFIN:ZDB-MRPHLNO-150805-1	Zfish	PMID:24307302
Biological Process	GO:0001889	liver development	zfyve9a	IMP	ZFIN:ZDB-MRPHLNO-150805-2	Zfish	PMID:24307302
Biological Process	GO:0001889	liver development	zfyve9a	IMP	ZFIN:ZDB-MRPHLNO-150805-1	Zfish	PMID:24307302
Biological Process	GO:0007179	transforming growth factor beta receptor signaling pathway	ZFYVE9	IMP		Human	PMID:9865696

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern