Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes ZBTB38
  • Mouse genes Zbtb38
  • Rat genes Zbtb38
  • Zfish genes zbtb38
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Zbtb38

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0003700	DNA-binding transcription factor activity	Zbtb38	IDA		Rat	PMID:15713629|RGD:8553663
Molecular Function	GO:0008327	methyl-CpG binding	ZBTB38	IDA		Human	PMID:16354688
Molecular Function	GO:0005515	protein binding	ZBTB38	IPI	UniProtKB:Q9P1Z0	Human	PMID:16354688
Molecular Function	GO:0005515	protein binding	ZBTB38	IPI	UniProtKB:O75081	Human	PMID:23251453
Molecular Function	GO:0005515	protein binding	ZBTB38	IPI	UniProtKB:Q7Z6E9	Human	PMID:24726359
Molecular Function	GO:0005515	protein binding	ZBTB38	IPI	UniProtKB:O14773	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	ZBTB38	IPI	UniProtKB:P50570-2	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	ZBTB38	IPI	UniProtKB:Q8N187	Human	PMID:32814053
Molecular Function	GO:0042803	protein homodimerization activity	ZBTB38	IDA		Human	PMID:16354688
Cellular Component	GO:0072562	blood microparticle	ZBTB38	HDA		Human	PMID:22516433
Cellular Component	GO:0005654	nucleoplasm	ZBTB38	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	ZBTB38	IDA		Human	PMID:16354688
Cellular Component	GO:0005634	nucleus	Zbtb38	IDA		Rat	PMID:15713629|RGD:8553663
Biological Process	GO:0006974	DNA damage response	ZBTB38	IMP		Human	PMID:24726359
Biological Process	GO:0045892	negative regulation of DNA-templated transcription	ZBTB38	IDA		Human	PMID:16354688
Biological Process	GO:0045892	negative regulation of DNA-templated transcription	ZBTB38	IDA		Human	PMID:24726359
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	Zbtb38	IDA		Rat	PMID:15713629|RGD:8553663
Biological Process	GO:0006275	regulation of DNA replication	ZBTB38	IMP		Human	PMID:24726359

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern