Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes VEGFB
  • Mouse genes Vegfb
  • Rat genes Vegfb
  • Zfish genes vegfba,vegfbb
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Vegfb

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0042802	identical protein binding	Vegfb	IPI	PR:P49766	Mouse	PMID:8702615
Molecular Function	GO:0005515	protein binding	VEGFB	IPI	UniProtKB:Q3V5L4	Human	PMID:19483306
Molecular Function	GO:0005515	protein binding	VEGFB	IPI	UniProtKB:Q53G59	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	Vegfb	IPI	UniProtKB:P15692	Mouse	PMID:8702615
Cellular Component	GO:0005576	extracellular region	Vegfb	IDA		Mouse	PMID:8702615
Cellular Component	GO:0005622	intracellular anatomical structure	Vegfb	IDA		Mouse	PMID:8702615
Biological Process	GO:0001525	angiogenesis	Vegfb	IEP		Rat	PMID:12230324|RGD:1580574
Biological Process	GO:0060048	cardiac muscle contraction	Vegfb	IMP	MGI:MGI:2178819	Mouse	PMID:10666423
Biological Process	GO:0061300	cerebellum vasculature development	vegfba	IMP	ZFIN:ZDB-MRPHLNO-160721-2	Zfish	PMID:26483474
Biological Process	GO:0061300	cerebellum vasculature development	vegfba	IMP	ZFIN:ZDB-MRPHLNO-160721-1	Zfish	PMID:26483474
Biological Process	GO:0060976	coronary vasculature development	Vegfb	IMP	MGI:MGI:2178819	Mouse	PMID:10666423
Biological Process	GO:0007507	heart development	Vegfb	IMP	MGI:MGI:2178819	Mouse	PMID:10666423
Biological Process	GO:0048666	neuron development	vegfba	IMP	ZFIN:ZDB-MRPHLNO-160721-1	Zfish	PMID:26483474
Biological Process	GO:0006493	protein O-linked glycosylation	Vegfb	IDA		Mouse	PMID:8702615
Biological Process	GO:0009410	response to xenobiotic stimulus	Vegfb	IEP		Rat	PMID:17264098|RGD:2314327

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern