Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes USP45
  • Mouse genes Usp45
  • Rat genes Usp45
  • Zfish genes usp45
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Usp45

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0004843	cysteine-type deubiquitinase activity	USP45	IDA		Human	PMID:14715245
Molecular Function	GO:0004843	cysteine-type deubiquitinase activity	USP45	IMP		Human	PMID:25538220
Molecular Function	GO:0004843	cysteine-type deubiquitinase activity	USP45	IMP		Human	PMID:30258100
Molecular Function	GO:0005515	protein binding	USP45	IPI	UniProtKB:P07992	Human	PMID:25538220
Molecular Function	GO:0005515	protein binding	USP45	IPI	UniProtKB:Q96EA4	Human	PMID:30258100
Molecular Function	GO:0005515	protein binding	Usp45	IPI	PR:P07903	Mouse	PMID:25538220
Cellular Component	GO:0005737	cytoplasm	USP45	IDA		Human	PMID:25538220
Cellular Component	GO:0005829	cytosol	USP45	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005654	nucleoplasm	USP45	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	USP45	IDA		Human	PMID:25538220
Cellular Component	GO:0001917	photoreceptor inner segment	USP45	IDA		Human	PMID:30573563
Cellular Component	GO:0001917	photoreceptor inner segment	usp45	IDA		Zfish	PMID:30573563|ZFIN:ZDB-PUB-181224-2
Biological Process	GO:0016477	cell migration	USP45	IMP		Human	PMID:30258100
Biological Process	GO:0006281	DNA repair	USP45	IMP		Human	PMID:25538220
Biological Process	GO:0003407	neural retina development	usp45	IMP		Zfish	PMID:27613029|ZFIN:ZDB-PUB-160911-4
Biological Process	GO:0045494	photoreceptor cell maintenance	Usp45	IMP		Mouse	MGI:MGI:6383248|PMID:30573563
Biological Process	GO:0045494	photoreceptor cell maintenance	usp45	IMP		Zfish	PMID:30573563|ZFIN:ZDB-PUB-181224-2
Biological Process	GO:0016579	protein deubiquitination	USP45	IMP		Human	PMID:25538220
Biological Process	GO:0016579	protein deubiquitination	USP45	IDA		Human	PMID:14715245

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern