Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes UPP1
  • Mouse genes Upp1
  • Rat genes Upp1
  • Zfish genes upp1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Upp1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0047847	deoxyuridine phosphorylase activity	Upp1	IDA		Mouse	PMID:14154460
Molecular Function	GO:0047847	deoxyuridine phosphorylase activity	Upp1	IDA		Mouse	PMID:7744869
Molecular Function	GO:0042802	identical protein binding	UPP1	IPI	UniProtKB:Q16831	Human	PMID:19291308
Molecular Function	GO:0042802	identical protein binding	UPP1	IPI	UniProtKB:Q16831	Human	PMID:20856879
Molecular Function	GO:0009032	thymidine phosphorylase activity	Upp1	IMP	MGI:MGI:3699164	Mouse	PMID:12077348
Molecular Function	GO:0004850	uridine phosphorylase activity	UPP1	IDA		Human	PMID:7488099
Molecular Function	GO:0004850	uridine phosphorylase activity	Upp1	IDA		Mouse	PMID:7744869
Molecular Function	GO:0004850	uridine phosphorylase activity	Upp1	IDA		Mouse	PMID:14715930
Molecular Function	GO:0004850	uridine phosphorylase activity	Upp1	IMP		Mouse	PMID:11956089
Molecular Function	GO:0004850	uridine phosphorylase activity	Upp1	IDA		Mouse	PMID:15772079
Cellular Component	GO:0005829	cytosol	Upp1	IDA		Mouse	PMID:14715930
Cellular Component	GO:0005829	cytosol	Upp1	IDA		Mouse	PMID:14154460
Cellular Component	GO:0005829	cytosol	Upp1	IDA		Mouse	PMID:7744869
Cellular Component	GO:0005654	nucleoplasm	UPP1	IDA		Human	GO_REF:0000052
Biological Process	GO:0042149	cellular response to glucose starvation	Upp1	IEP		Rat	PMID:18457515|RGD:2317094
Biological Process	GO:0006248	CMP catabolic process	Upp1	IDA		Mouse	PMID:14715930
Biological Process	GO:0006249	dCMP catabolic process	Upp1	IDA		Mouse	PMID:7744869
Biological Process	GO:0046074	dTMP catabolic process	Upp1	IMP	MGI:MGI:3699164	Mouse	PMID:12077348
Biological Process	GO:0046079	dUMP catabolic process	Upp1	IDA		Mouse	PMID:14154460
Biological Process	GO:0006220	pyrimidine nucleotide metabolic process	Upp1	IMP	MGI:MGI:3586525	Mouse	PMID:15772079
Biological Process	GO:0046050	UMP catabolic process	Upp1	IDA		Mouse	PMID:7744869
Biological Process	GO:0046050	UMP catabolic process	Upp1	IDA		Mouse	PMID:14715930
Biological Process	GO:0044206	UMP salvage	Upp1	IMP		Mouse	PMID:11956089
Biological Process	GO:0006218	uridine catabolic process	UPP1	IDA		Human	PMID:7488099
Biological Process	GO:0006218	uridine catabolic process	Upp1	IDA		Mouse	MGI:MGI:73237|PMID:7744869
Biological Process	GO:0006218	uridine catabolic process	Upp1	IDA		Mouse	MGI:MGI:5476603|PMID:23355744
Biological Process	GO:0046108	uridine metabolic process	Upp1	IMP	MGI:MGI:3586525	Mouse	PMID:15772079

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern