Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes UBR3
  • Mouse genes Ubr3
  • Rat genes Ubr3
  • Zfish genes ubr3
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Ubr3

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	Ubr3	IPI	PR:P63147	Mouse	PMID:17462990
Molecular Function	GO:0005515	protein binding	Ubr3	IPI	PR:Q9Z255	Mouse	PMID:17462990
Molecular Function	GO:0061630	ubiquitin protein ligase activity	Ubr3	IDA		Mouse	PMID:17462990
Molecular Function	GO:0004842	ubiquitin-protein transferase activity	Ubr3	IDA		Mouse	MGI:MGI:3718176|PMID:17462990
Biological Process	GO:0009792	embryo development ending in birth or egg hatching	Ubr3	IMP		Mouse	MGI:MGI:3718176|PMID:17462990
Biological Process	GO:0048592	eye morphogenesis	ubr3	IMP	ZFIN:ZDB-GENO-170105-3	Zfish	PMID:27195754
Biological Process	GO:0001701	in utero embryonic development	Ubr3	IMP	MGI:MGI:3718505	Mouse	PMID:17462990
Biological Process	GO:1904878	negative regulation of calcium ion transmembrane transport via high voltage-gated calcium channel	Ubr3	IMP		Rat	PMID:32988261|RGD:152176655
Biological Process	GO:0042048	olfactory behavior	Ubr3	IMP	MGI:MGI:3718505	Mouse	PMID:17462990
Biological Process	GO:0045732	positive regulation of protein catabolic process	Ubr3	IMP		Rat	PMID:32988261|RGD:152176655
Biological Process	GO:0007608	sensory perception of smell	Ubr3	IMP		Mouse	MGI:MGI:3718176|PMID:17462990
Biological Process	GO:0001967	suckling behavior	Ubr3	IMP	MGI:MGI:3718505	Mouse	PMID:17462990
Biological Process	GO:0006511	ubiquitin-dependent protein catabolic process	Ubr3	IDA		Mouse	MGI:MGI:3718176|PMID:17462990

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern