Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes UBN1
  • Mouse genes Ubn1
  • Rat genes Ubn1
  • Zfish genes ubn1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Ubn1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	UBN1	IPI	UniProtKB:O95049	Human	PMID:18823282
Molecular Function	GO:0005515	protein binding	UBN1	IPI	UniProtKB:Q07157	Human	PMID:18823282
Molecular Function	GO:0005515	protein binding	UBN1	IPI	UniProtKB:Q9UDY2	Human	PMID:18823282
Molecular Function	GO:0005515	protein binding	UBN1	IPI	UniProtKB:P54198	Human	PMID:19029251
Cellular Component	GO:0005923	bicellular tight junction	Ubn1	IDA		Mouse	MGI:MGI:5437435|PMID:18823282
Cellular Component	GO:0034451	centriolar satellite	UBN1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0016604	nuclear body	UBN1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005654	nucleoplasm	UBN1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	UBN1	IDA		Human	PMID:10725330
Biological Process	GO:0006334	nucleosome assembly	UBN1	IDA		Human	PMID:14718166

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern