Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes U2AF1
  • Mouse genes U2af1
  • Rat genes U2af1
  • Zfish genes u2af1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set U2af1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	U2AF1	IPI	UniProtKB:P26368	Human	PMID:11551507
Molecular Function	GO:0005515	protein binding	U2AF1	IPI	UniProtKB:Q86X95	Human	PMID:15652350
Molecular Function	GO:0005515	protein binding	U2AF1	IPI	UniProtKB:P26368	Human	PMID:16189514
Molecular Function	GO:0005515	protein binding	U2AF1	IPI	UniProtKB:Q9BQA5	Human	PMID:17577209
Molecular Function	GO:0005515	protein binding	U2AF1	IPI	UniProtKB:P82979	Human	PMID:18559666
Molecular Function	GO:0005515	protein binding	U2AF1	IPI	UniProtKB:P84103	Human	PMID:18559666
Molecular Function	GO:0005515	protein binding	U2AF1	IPI	UniProtKB:Q01130	Human	PMID:18559666
Molecular Function	GO:0005515	protein binding	U2AF1	IPI	UniProtKB:Q07955	Human	PMID:18559666
Molecular Function	GO:0005515	protein binding	U2AF1	IPI	UniProtKB:Q6Y7W6	Human	PMID:20696395
Molecular Function	GO:0005515	protein binding	U2AF1	IPI	UniProtKB:P26368	Human	PMID:21460037
Molecular Function	GO:0005515	protein binding	U2AF1	IPI	UniProtKB:P26368	Human	PMID:21516116
Molecular Function	GO:0005515	protein binding	U2AF1	IPI	UniProtKB:P26368	Human	PMID:21988832
Molecular Function	GO:0005515	protein binding	U2AF1	IPI	UniProtKB:Q07955	Human	PMID:21988832
Molecular Function	GO:0005515	protein binding	U2AF1	IPI	UniProtKB:P26368	Human	PMID:22365833
Molecular Function	GO:0005515	protein binding	U2AF1	IPI	UniProtKB:P78362	Human	PMID:22365833
Molecular Function	GO:0005515	protein binding	U2AF1	IPI	UniProtKB:Q01130	Human	PMID:22365833
Molecular Function	GO:0005515	protein binding	U2AF1	IPI	UniProtKB:Q13435	Human	PMID:22365833
Molecular Function	GO:0005515	protein binding	U2AF1	IPI	UniProtKB:Q8N5F7	Human	PMID:22365833
Molecular Function	GO:0005515	protein binding	U2AF1	IPI	UniProtKB:Q96SB4	Human	PMID:22365833
Molecular Function	GO:0005515	protein binding	U2AF1	IPI	UniProtKB:O43463	Human	PMID:23455924
Molecular Function	GO:0005515	protein binding	U2AF1	IPI	UniProtKB:Q6NYC1	Human	PMID:23455924
Molecular Function	GO:0005515	protein binding	U2AF1	IPI	UniProtKB:P78362	Human	PMID:23602568
Molecular Function	GO:0005515	protein binding	U2AF1	IPI	UniProtKB:Q96SB4	Human	PMID:23602568
Molecular Function	GO:0005515	protein binding	U2AF1	IPI	UniProtKB:P26368	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	U2AF1	IPI	UniProtKB:P61978	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	U2AF1	IPI	UniProtKB:P63010	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	U2AF1	IPI	UniProtKB:P78362	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	U2AF1	IPI	UniProtKB:P54253	Human	PMID:25959826
Molecular Function	GO:0005515	protein binding	U2AF1	IPI	UniProtKB:P26368-2	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	U2AF1	IPI	UniProtKB:Q8N4J0	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	U2AF1	IPI	UniProtKB:Q96SB4	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	U2AF1	IPI	UniProtKB:P61978	Human	PMID:29892012
Molecular Function	GO:0005515	protein binding	U2AF1	IPI	UniProtKB:A7MD48	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	U2AF1	IPI	UniProtKB:O95678	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	U2AF1	IPI	UniProtKB:P04264	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	U2AF1	IPI	UniProtKB:P26368-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	U2AF1	IPI	UniProtKB:P40692	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	U2AF1	IPI	UniProtKB:P62995	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	U2AF1	IPI	UniProtKB:P63010-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	U2AF1	IPI	UniProtKB:P84103	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	U2AF1	IPI	UniProtKB:Q10567-3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	U2AF1	IPI	UniProtKB:Q16560-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	U2AF1	IPI	UniProtKB:Q5JST6	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	U2AF1	IPI	UniProtKB:Q6FHY5	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	U2AF1	IPI	UniProtKB:Q8N4J0	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	U2AF1	IPI	UniProtKB:Q8TAU3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	U2AF1	IPI	UniProtKB:P42858	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	U2AF1	IPI	UniProtKB:P54253	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	U2af1	IPI	UniProtKB:P83870	Mouse	MGI:MGI:4839441|PMID:18758164
Molecular Function	GO:0003723	RNA binding	U2AF1	HDA		Human	PMID:22658674
Molecular Function	GO:0003723	RNA binding	U2AF1	HDA		Human	PMID:22681889
Molecular Function	GO:0050733	RS domain binding	U2af1	IPI	PR:Q9DBU6	Mouse	PMID:15798186
Cellular Component	GO:0071013	catalytic step 2 spliceosome	U2AF1	IDA		Human	PMID:11991638
Cellular Component	GO:0016607	nuclear speck	U2af1	IDA		Mouse	MGI:MGI:4839441|PMID:18758164
Cellular Component	GO:0005654	nucleoplasm	U2AF1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005681	spliceosomal complex	U2AF1	IPI		Human	PMID:11551507
Cellular Component	GO:0005681	spliceosomal complex	U2AF1	IDA		Human	PMID:9731529
Cellular Component	GO:0089701	U2AF complex	U2AF1	IPI		Human	PMID:11551507
Cellular Component	GO:0089701	U2AF complex	U2AF1	IDA		Human	PMID:1824937
Cellular Component	GO:0089701	U2AF complex	U2AF1	IDA		Human	PMID:2531895

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern