Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes TUFM
  • Mouse genes Tufm
  • Rat genes Tufm
  • Zfish genes tufm
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Tufm

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	TUFM	IPI	UniProtKB:P25705	Human	PMID:11741979
Molecular Function	GO:0005515	protein binding	TUFM	IPI	UniProtKB:Q15041	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	TUFM	IPI	UniProtKB:Q8IVP5	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	TUFM	IPI	UniProtKB:Q8IZU0	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	TUFM	IPI	UniProtKB:Q96DZ9	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	TUFM	IPI	UniProtKB:P03427	Human	PMID:28611246
Molecular Function	GO:0005515	protein binding	TUFM	IPI	UniProtKB:Q86UT6	Human	PMID:28611246
Molecular Function	GO:0005515	protein binding	TUFM	IPI	UniProtKB:Q8IZU0	Human	PMID:31515488
Molecular Function	GO:0003723	RNA binding	TUFM	HDA		Human	PMID:22658674
Molecular Function	GO:0003746	translation elongation factor activity	TUFM	IDA		Human	PMID:9332382
Cellular Component	GO:0070062	extracellular exosome	TUFM	HDA		Human	PMID:20458337
Cellular Component	GO:0016020	membrane	TUFM	HDA		Human	PMID:19946888
Cellular Component	GO:0005743	mitochondrial inner membrane	Tufm	HDA		Mouse	PMID:12865426
Cellular Component	GO:0042645	mitochondrial nucleoid	TUFM	IDA		Human	PMID:18063578
Cellular Component	GO:0005739	mitochondrion	TUFM	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005739	mitochondrion	TUFM	HDA		Human	PMID:20833797
Cellular Component	GO:0005739	mitochondrion	TUFM	IDA		Human	PMID:9332382
Cellular Component	GO:0005739	mitochondrion	Tufm	HDA		Mouse	PMID:14651853
Cellular Component	GO:0005739	mitochondrion	Tufm	HDA		Mouse	PMID:18614015
Cellular Component	GO:0005739	mitochondrion	Tufm	IDA		Rat	PMID:21350184|RGD:10401125
Cellular Component	GO:0043209	myelin sheath	Tufm	HDA		Mouse	MGI:MGI:3834050|PMID:17634366
Cellular Component	GO:0045202	synapse	Tufm	EXP		Rat	PMID:14532281|RGD:13702402
Cellular Component	GO:0045202	synapse	Tufm	IDA		Rat	PMID:14532281|RGD:13702402
Biological Process	GO:0045471	response to ethanol	Tufm	IEP		Rat	PMID:21350184|RGD:10401125
Biological Process	GO:0006414	translational elongation	TUFM	IDA		Human	PMID:9332382

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern