Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes TUBA3C,TUBA3D,TUBA3E
  • Mouse genes Tuba3a
  • Rat genes Tuba3a,Tuba3b
  • Zfish genes tuba7l
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Tuba3a

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	TUBA3E	IPI	UniProtKB:Q13287	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	TUBA3E	IPI	UniProtKB:Q13287	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TUBA3E	IPI	UniProtKB:Q13643	Human	PMID:32296183
Cellular Component	GO:0036064	ciliary basal body	Tuba3a	IDA		Mouse	PMID:18239929
Cellular Component	GO:0005929	cilium	Tuba3a	IDA		Mouse	PMID:18239929
Cellular Component	GO:0005874	microtubule	Tuba3a	IDA		Mouse	PMID:18239929
Cellular Component	GO:0015630	microtubule cytoskeleton	TUBA3C	IDA		Human	GO_REF:0000052
Cellular Component	GO:0015630	microtubule cytoskeleton	TUBA3D	IDA		Human	GO_REF:0000052
Cellular Component	GO:0015630	microtubule cytoskeleton	TUBA3E	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	TUBA3C	HDA		Human	PMID:21630459
Cellular Component	GO:0005634	nucleus	TUBA3E	HDA		Human	PMID:21630459
Biological Process	GO:0036098	male germ-line stem cell population maintenance	Tuba3a	IMP	MGI:MGI:1095408	Mouse	PMID:34326397

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern