Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes TRMT10C
  • Mouse genes Trmt10c
  • Rat genes Trmt10c
  • Zfish genes trmt10c
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Trmt10c

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0042802	identical protein binding	TRMT10C	IPI	UniProtKB:Q7L0Y3	Human	PMID:29880640
Molecular Function	GO:0061953	mRNA (adenine-N1-)-methyltransferase activity	TRMT10C	IDA		Human	PMID:29072297
Molecular Function	GO:0005515	protein binding	TRMT10C	IPI	UniProtKB:Q99714	Human	PMID:18984158
Molecular Function	GO:0005515	protein binding	TRMT10C	IPI	UniProtKB:Q99714	Human	PMID:23042678
Molecular Function	GO:0005515	protein binding	TRMT10C	IPI	UniProtKB:Q99714	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	TRMT10C	IPI	UniProtKB:Q99714	Human	PMID:29040705
Molecular Function	GO:0005515	protein binding	TRMT10C	IPI	UniProtKB:Q99714	Human	PMID:29880640
Molecular Function	GO:0003723	RNA binding	TRMT10C	HDA		Human	PMID:22658674
Molecular Function	GO:0003723	RNA binding	TRMT10C	HDA		Human	PMID:22681889
Molecular Function	GO:0016429	tRNA (adenine-N1-)-methyltransferase activity	TRMT10C	IDA		Human	PMID:23042678
Molecular Function	GO:0009019	tRNA (guanine-N1-)-methyltransferase activity	TRMT10C	IDA		Human	PMID:23042678
Molecular Function	GO:0000049	tRNA binding	TRMT10C	IDA		Human	PMID:29040705
Cellular Component	GO:0042645	mitochondrial nucleoid	TRMT10C	IDA		Human	PMID:24703694
Cellular Component	GO:0030678	mitochondrial ribonuclease P complex	TRMT10C	IPI		Human	PMID:29880640
Cellular Component	GO:0005739	mitochondrion	TRMT10C	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005739	mitochondrion	TRMT10C	IDA		Human	PMID:23042678
Cellular Component	GO:0005739	mitochondrion	TRMT10C	IMP		Human	PMID:27132592
Cellular Component	GO:0005739	mitochondrion	TRMT10C	IDA		Human	PMID:29880640
Cellular Component	GO:0005739	mitochondrion	Trmt10c	HDA		Mouse	PMID:18614015
Cellular Component	GO:0005739	mitochondrion	Trmt10c	IDA		Mouse	PMID:24703694
Cellular Component	GO:0005654	nucleoplasm	TRMT10C	IDA		Human	GO_REF:0000052
Cellular Component	GO:0043527	tRNA methyltransferase complex	TRMT10C	IPI		Human	PMID:23042678
Biological Process	GO:0000964	mitochondrial RNA 5'-end processing	TRMT10C	IMP		Human	PMID:21593607
Biological Process	GO:1990180	mitochondrial tRNA 3'-end processing	TRMT10C	IDA		Human	PMID:29040705
Biological Process	GO:0097745	mitochondrial tRNA 5'-end processing	TRMT10C	IDA		Human	PMID:29040705
Biological Process	GO:0097745	mitochondrial tRNA 5'-end processing	TRMT10C	IDA		Human	PMID:29880640
Biological Process	GO:0070901	mitochondrial tRNA methylation	TRMT10C	IDA		Human	PMID:23042678
Biological Process	GO:0090646	mitochondrial tRNA processing	TRMT10C	IMP		Human	PMID:27132592
Biological Process	GO:0080009	mRNA methylation	TRMT10C	IDA		Human	PMID:29072297
Biological Process	GO:0070131	positive regulation of mitochondrial translation	TRMT10C	IMP		Human	PMID:27132592

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern