Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes TRIM35
  • Mouse genes Trim35
  • Rat genes Trim35
  • Zfish genes si:ch211-12p12.2,si:ch211-175l6.1,si:ch73-106l15.2,si:ch73-106l15.3,si:ch73-144l3.1,si:dkey-37m8.11,trim 35-44,trim35-1,trim35-12,trim35-13,trim35-14,trim35-19,trim35-20,trim35-21,trim35-22,trim35-23,trim35-24,trim35-25,trim35-27,trim35-28,trim35-29,trim35-3,trim35-30,trim35-31,trim35-33,trim35-34,trim35-39,trim35-4,trim35-40,trim35-7,trim35-9,zgc:136767,zmp:0000001316
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Trim35

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	Trim35	IPI	UniProtKB:P70434	Mouse	MGI:MGI:5639149|PMID:25907537
Cellular Component	GO:0005737	cytoplasm	Trim35	IDA		Mouse	PMID:12692137
Cellular Component	GO:0005737	cytoplasm	Trim35	IDA		Mouse	PMID:14662771
Cellular Component	GO:0005634	nucleus	Trim35	IDA		Mouse	PMID:14662771
Biological Process	GO:0045087	innate immune response	TRIM35	IDA		Human	PMID:18248090
Biological Process	GO:0014004	microglia differentiation	trim35-28	IMP	ZFIN:ZDB-GENO-211102-16	Zfish	PMID:32398256
Biological Process	GO:0033028	myeloid cell apoptotic process	Trim35	IDA		Mouse	PMID:12692137
Biological Process	GO:0008285	negative regulation of cell population proliferation	Trim35	IDA		Mouse	PMID:14662771
Biological Process	GO:0045930	negative regulation of mitotic cell cycle	TRIM35	IDA		Human	PMID:14662771
Biological Process	GO:0043065	positive regulation of apoptotic process	TRIM35	IDA		Human	PMID:14662771
Biological Process	GO:0033034	positive regulation of myeloid cell apoptotic process	Trim35	IDA		Mouse	PMID:12692137
Biological Process	GO:0044790	suppression of viral release by host	TRIM35	IDA		Human	PMID:18248090

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern