Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes TRIM17
  • Mouse genes Trim17
  • Rat genes Trim17
  • Zfish genes btr04,btr05,btr06,btr07,btr18,btr20,btr21,btr22,btr23,btr24,btr25,btr26,btr29,btr32,si:ch211-216p19.6,si:dkey-46i9.6,zgc:173581
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Trim17

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	TRIM17	IPI	UniProtKB:Q9HCM9	Human	PMID:16189514
Molecular Function	GO:0005515	protein binding	TRIM17	IPI	UniProtKB:Q96DX7	Human	PMID:19358823
Molecular Function	GO:0005515	protein binding	TRIM17	IPI	UniProtKB:Q8WV44	Human	PMID:22493164
Molecular Function	GO:0005515	protein binding	TRIM17	IPI	UniProtKB:Q9HCM9	Human	PMID:22493164
Molecular Function	GO:0005515	protein binding	TRIM17	IPI	UniProtKB:O75385	Human	PMID:25127057
Molecular Function	GO:0005515	protein binding	TRIM17	IPI	UniProtKB:O95166	Human	PMID:25127057
Molecular Function	GO:0005515	protein binding	TRIM17	IPI	UniProtKB:Q13501	Human	PMID:25127057
Molecular Function	GO:0005515	protein binding	TRIM17	IPI	UniProtKB:Q14457	Human	PMID:25127057
Molecular Function	GO:0005515	protein binding	TRIM17	IPI	UniProtKB:Q8IYI6	Human	PMID:25127057
Molecular Function	GO:0005515	protein binding	TRIM17	IPI	UniProtKB:Q9H492	Human	PMID:25127057
Molecular Function	GO:0005515	protein binding	TRIM17	IPI	UniProtKB:Q9HCM9	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	TRIM17	IPI	UniProtKB:O14964	Human	PMID:26871637
Molecular Function	GO:0005515	protein binding	TRIM17	IPI	UniProtKB:Q9HCM9	Human	PMID:29892012
Molecular Function	GO:0005515	protein binding	TRIM17	IPI	UniProtKB:Q9HCM9	Human	PMID:31515488
Molecular Function	GO:0005515	protein binding	TRIM17	IPI	UniProtKB:O14964	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TRIM17	IPI	UniProtKB:Q6FHY5	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TRIM17	IPI	UniProtKB:Q8WV44	Human	PMID:32296183
Molecular Function	GO:0030674	protein-macromolecule adaptor activity	TRIM17	IPI	UniProtKB:O75385|UniProtKB:Q8IYI6	Human	PMID:25127057
Molecular Function	GO:0061630	ubiquitin protein ligase activity	btr20	IDA		Zfish	PMID:25542153
Molecular Function	GO:0004842	ubiquitin-protein transferase activity	TRIM17	IDA		Human	PMID:19358823
Cellular Component	GO:0005737	cytoplasm	btr20	IDA		Zfish	PMID:25542153
Biological Process	GO:0006914	autophagy	TRIM17	IDA		Human	PMID:25127057
Biological Process	GO:0051865	protein autoubiquitination	TRIM17	IDA		Human	PMID:19358823
Biological Process	GO:0032880	regulation of protein localization	TRIM17	IMP		Human	PMID:25127057

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern