Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes TRA2A
  • Mouse genes Tra2a
  • Rat genes Tra2a
  • Zfish genes tra2a
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Tra2a

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0042802	identical protein binding	Tra2a	IPI	UniProtKB:Q6PFR5	Mouse	MGI:MGI:3616383|PMID:16249178
Molecular Function	GO:0005515	protein binding	TRA2A	IPI	UniProtKB:P78362	Human	PMID:23602568
Molecular Function	GO:0005515	protein binding	TRA2A	IPI	UniProtKB:O43592	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TRA2A	IPI	UniProtKB:Q15287	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TRA2A	IPI	UniProtKB:Q96A72	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TRA2A	IPI	UniProtKB:P78362	Human	PMID:32707033
Molecular Function	GO:0005515	protein binding	Tra2a	IPI	UniProtKB:B5TVM2|UniProtKB:Q8CBR1	Mouse	MGI:MGI:6810798|PMID:28785060
Molecular Function	GO:0005515	protein binding	Tra2a	IPI	UniProtKB:Q8BL97|UniProtKB:Q9D1X0	Mouse	MGI:MGI:3616383|PMID:16249178
Molecular Function	GO:0005515	protein binding	Tra2a	IPI	RGD:621706	Rat	PMID:10564280|RGD:634512
Molecular Function	GO:0003723	RNA binding	TRA2A	HDA		Human	PMID:22658674
Molecular Function	GO:0003723	RNA binding	TRA2A	HDA		Human	PMID:22681889
Cellular Component	GO:0043231	intracellular membrane-bounded organelle	TRA2A	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005730	nucleolus	TRA2A	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005654	nucleoplasm	TRA2A	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	TRA2A	IDA		Human	PMID:9546399
Cellular Component	GO:0005634	nucleus	Tra2a	IDA		Mouse	MGI:MGI:6810798|PMID:28785060
Cellular Component	GO:0005634	nucleus	Tra2a	IDA		Mouse	PMID:11401487
Biological Process	GO:0000398	mRNA splicing, via spliceosome	TRA2A	IDA		Human	PMID:9546399
Biological Process	GO:0048026	positive regulation of mRNA splicing, via spliceosome	Tra2a	IDA		Mouse	PMID:22194695

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern