Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes TOR1B
  • Mouse genes Tor1b
  • Rat genes Tor1b
  • Zfish genes tor1,tor1l1,tor1l2,tor1l3
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Tor1b

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0016887	ATP hydrolysis activity	TOR1B	IDA		Human	PMID:20015956
Molecular Function	GO:0016887	ATP hydrolysis activity	TOR1B	IDA		Human	PMID:23569223
Molecular Function	GO:0042802	identical protein binding	TOR1B	IPI	UniProtKB:O14657	Human	PMID:20015956
Molecular Function	GO:0042802	identical protein binding	Tor1b	IPI	PR:Q9ER41	Mouse	PMID:20015956
Molecular Function	GO:0005515	protein binding	TOR1B	IPI	UniProtKB:O14656	Human	PMID:15147511
Molecular Function	GO:0005515	protein binding	TOR1B	IPI	UniProtKB:Q8NFQ8	Human	PMID:24275647
Molecular Function	GO:0005515	protein binding	Tor1b	IPI	PR:Q921T2	Mouse	PMID:20457914
Cellular Component	GO:0005737	cytoplasm	Tor1b	IDA		Mouse	PMID:11730696
Cellular Component	GO:0005829	cytosol	tor1	IDA		Zfish	PMID:23028827
Cellular Component	GO:0005783	endoplasmic reticulum	TOR1B	IDA		Human	PMID:15147511
Cellular Component	GO:0005788	endoplasmic reticulum lumen	TOR1B	IDA		Human	PMID:20015956
Cellular Component	GO:0005788	endoplasmic reticulum lumen	Tor1b	IDA		Mouse	PMID:20015956
Cellular Component	GO:0070062	extracellular exosome	TOR1B	HDA		Human	PMID:19199708
Cellular Component	GO:0005635	nuclear envelope	TOR1B	IDA		Human	PMID:15147511
Cellular Component	GO:0005635	nuclear envelope	Tor1b	IDA		Mouse	PMID:20457914
Cellular Component	GO:0005635	nuclear envelope	tor1	IDA		Zfish	PMID:23028827
Biological Process	GO:0007029	endoplasmic reticulum organization	TOR1B	IDA		Human	PMID:24275647
Biological Process	GO:0071763	nuclear membrane organization	Tor1b	IGI	MGI:MGI:1353568	Mouse	PMID:20457914

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern