Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes TMOD1
  • Mouse genes Tmod1
  • Rat genes Tmod1
  • Zfish genes tmod1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Tmod1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0003779	actin binding	TMOD1	IDA		Human	PMID:26370058
Molecular Function	GO:0005523	tropomyosin binding	Tmod1	IDA		Mouse	PMID:20368620
Molecular Function	GO:0005523	tropomyosin binding	Tmod1	IDA		Rat	PMID:8886980|RGD:61770
Cellular Component	GO:0005884	actin filament	TMOD1	IDA		Human	PMID:26370058
Cellular Component	GO:0030863	cortical cytoskeleton	Tmod1	IDA		Mouse	PMID:18723693
Cellular Component	GO:0005737	cytoplasm	Tmod1	IDA		Rat	PMID:15123707|RGD:1580392
Cellular Component	GO:0016020	membrane	Tmod1	IDA		Mouse	PMID:18723693
Cellular Component	GO:0030016	myofibril	TMOD1	IDA		Human	PMID:26370058
Cellular Component	GO:0030016	myofibril	Tmod1	IDA		Mouse	PMID:14657235
Cellular Component	GO:0005634	nucleus	Tmod1	IDA		Rat	PMID:15123707|RGD:1580392
Cellular Component	GO:0030017	sarcomere	TMOD1	IDA		Human	PMID:26370058
Cellular Component	GO:0030017	sarcomere	Tmod1	IDA		Mouse	PMID:24840128
Cellular Component	GO:0005865	striated muscle thin filament	TMOD1	IDA		Human	PMID:25250574
Biological Process	GO:0008344	adult locomotory behavior	Tmod1	IMP	MGI:MGI:2687078	Mouse	PMID:20368620
Biological Process	GO:0070307	lens fiber cell development	Tmod1	IGI	UniProtKB:Q6NVD9	Mouse	MGI:MGI:5475090|PMID:23144950
Biological Process	GO:0006936	muscle contraction	Tmod1	IMP	MGI:MGI:2687078	Mouse	PMID:20368620
Biological Process	GO:0030239	myofibril assembly	Tmod1	IMP	MGI:MGI:2687078	Mouse	PMID:14657235

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern