Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes TM9SF4
  • Mouse genes Tm9sf4
  • Rat genes Tm9sf4
  • Zfish genes tm9sf4
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Tm9sf4

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	TM9SF4	IPI	UniProtKB:Q9UI12	Human	PMID:25659576
Molecular Function	GO:0005515	protein binding	TM9SF4	IPI	UniProtKB:P42345	Human	PMID:29125601
Cellular Component	GO:0005769	early endosome	TM9SF4	IDA		Human	PMID:19893578
Cellular Component	GO:0005794	Golgi apparatus	TM9SF4	IDA		Human	PMID:25999474
Biological Process	GO:0007155	cell adhesion	TM9SF4	IMP		Human	PMID:25961573
Biological Process	GO:0006909	phagocytosis	TM9SF4	IMP		Human	PMID:19893578
Biological Process	GO:0070863	positive regulation of protein exit from endoplasmic reticulum	TM9SF4	IMP		Human	PMID:25999474
Biological Process	GO:2000010	positive regulation of protein localization to cell surface	TM9SF4	IMP		Human	PMID:25999474
Biological Process	GO:0051453	regulation of intracellular pH	TM9SF4	IMP		Human	PMID:19893578
Biological Process	GO:0001666	response to hypoxia	TM9SF4	IDA		Human	PMID:25961573
Biological Process	GO:0070072	vacuolar proton-transporting V-type ATPase complex assembly	TM9SF4	IMP		Human	PMID:25659576

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern