Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes TGS1
  • Mouse genes Tgs1
  • Rat genes Tgs1
  • Zfish genes lyn,tgs1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Tgs1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	TGS1	IPI	UniProtKB:P22087	Human	PMID:21522132
Molecular Function	GO:0005515	protein binding	TGS1	IPI	UniProtKB:Q9Y2X3	Human	PMID:21522132
Molecular Function	GO:0005515	protein binding	TGS1	IPI	UniProtKB:P22087	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	TGS1	IPI	UniProtKB:P36508	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TGS1	IPI	UniProtKB:Q86UR1-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	Tgs1	IPI	UniProtKB:P97462	Mouse	PMID:12943661
Molecular Function	GO:0071164	RNA trimethylguanosine synthase activity	TGS1	IDA		Human	PMID:16687569
Cellular Component	GO:0005737	cytoplasm	TGS1	IDA		Human	PMID:12943661
Cellular Component	GO:0005829	cytosol	TGS1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005615	extracellular space	TGS1	HDA		Human	PMID:22664934
Cellular Component	GO:0005634	nucleus	TGS1	IDA		Human	PMID:12943661
Biological Process	GO:0036261	7-methylguanosine cap hypermethylation	TGS1	IDA		Human	PMID:16687569
Biological Process	GO:0030593	neutrophil chemotaxis	lyn	IMP	ZFIN:ZDB-MRPHLNO-120118-1	Zfish	PMID:25582859
Biological Process	GO:0030593	neutrophil chemotaxis	lyn	IGI	ZFIN:ZDB-GENE-101026-3	Zfish	PMID:25582859
Biological Process	GO:0090022	regulation of neutrophil chemotaxis	lyn	IMP	ZFIN:ZDB-MRPHLNO-120118-1	Zfish	PMID:22101434
Biological Process	GO:0090022	regulation of neutrophil chemotaxis	lyn	IMP	ZFIN:ZDB-MRPHLNO-120118-2	Zfish	PMID:22101434
Biological Process	GO:0009611	response to wounding	lyn	IMP	ZFIN:ZDB-MRPHLNO-120118-1	Zfish	PMID:22101434
Biological Process	GO:0009611	response to wounding	lyn	IMP	ZFIN:ZDB-MRPHLNO-120118-2	Zfish	PMID:22101434

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern