Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes TFPI
  • Mouse genes Tfpi
  • Rat genes Tfpi
  • Zfish genes tfpia
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Tfpi

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Cellular Component	GO:0005901	caveola	TFPI	IDA		Human	PMID:21868574
Cellular Component	GO:0009986	cell surface	TFPI	HDA		Human	PMID:19581412
Cellular Component	GO:0009986	cell surface	TFPI	IDA		Human	PMID:21868574
Cellular Component	GO:0005615	extracellular space	TFPI	IDA		Human	PMID:19065458
Cellular Component	GO:0005615	extracellular space	Tfpi	HDA		Mouse	MGI:MGI:5640941|PMID:24006456
Cellular Component	GO:0005615	extracellular space	Tfpi	IDA		Rat	PMID:12083485|RGD:1299120
Biological Process	GO:0071347	cellular response to interleukin-1	Tfpi	IEP		Rat	PMID:11816723|RGD:727341
Biological Process	GO:0071222	cellular response to lipopolysaccharide	Tfpi	IEP		Rat	PMID:11816723|RGD:727341
Biological Process	GO:0071383	cellular response to steroid hormone stimulus	TFPI	IEP		Human	PMID:21868574
Biological Process	GO:0030195	negative regulation of blood coagulation	TFPI	IDA		Human	PMID:21868574
Biological Process	GO:0032355	response to estradiol	Tfpi	IEP		Rat	PMID:15857755|RGD:11062060
Biological Process	GO:0032496	response to lipopolysaccharide	Tfpi	IEP		Rat	PMID:9426395|RGD:11060265

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern