Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes TDRD9
  • Mouse genes Tdrd9
  • Rat genes Tdrd9
  • Zfish genes tdrd9
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Tdrd9

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0016887	ATP hydrolysis activity	Tdrd9	IMP		Mouse	MGI:MGI:5908740|PMID:28633017
Molecular Function	GO:0005515	protein binding	Tdrd9	IPI	UniProtKB:Q8CGT6	Mouse	MGI:MGI:4418580|PMID:20059948
Cellular Component	GO:0005737	cytoplasm	TDRD9	IDA		Human	PMID:28536242
Cellular Component	GO:0005634	nucleus	TDRD9	IDA		Human	PMID:28536242
Cellular Component	GO:0005634	nucleus	Tdrd9	IDA		Mouse	MGI:MGI:4418580|PMID:20059948
Cellular Component	GO:0071547	piP-body	Tdrd9	IDA		Mouse	MGI:MGI:4417983|PMID:20011505
Cellular Component	GO:0071547	piP-body	Tdrd9	IDA		Mouse	MGI:MGI:4418580|PMID:20059948
Biological Process	GO:0043046	DNA methylation involved in gamete generation	Tdrd9	IMP		Mouse	MGI:MGI:4418580|PMID:20059948
Biological Process	GO:0009566	fertilization	Tdrd9	IMP		Mouse	MGI:MGI:4418580|PMID:20059948
Biological Process	GO:0007141	male meiosis I	Tdrd9	IMP		Mouse	MGI:MGI:5908740|PMID:28633017
Biological Process	GO:0007140	male meiotic nuclear division	Tdrd9	IMP		Mouse	MGI:MGI:4418580|PMID:20059948
Biological Process	GO:0010529	negative regulation of transposition	Tdrd9	IMP		Mouse	MGI:MGI:5908740|PMID:28633017
Biological Process	GO:0010529	negative regulation of transposition	Tdrd9	IMP		Mouse	PMID:27473657
Biological Process	GO:0034587	piRNA processing	Tdrd9	IMP		Mouse	MGI:MGI:5908740|PMID:28633017
Biological Process	GO:0034587	piRNA processing	Tdrd9	IMP		Mouse	MGI:MGI:4418580|PMID:20059948
Biological Process	GO:0007283	spermatogenesis	TDRD9	IMP		Human	PMID:28536242
Biological Process	GO:0007283	spermatogenesis	Tdrd9	IMP		Mouse	MGI:MGI:5908740|PMID:28633017
Biological Process	GO:0007283	spermatogenesis	Tdrd9	IMP		Mouse	MGI:MGI:4418580|PMID:20059948

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern