Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes TDRD7
  • Mouse genes Tdrd7
  • Rat genes Tdrd7
  • Zfish genes tdrd7a,tdrd7b
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Tdrd7

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0003729	mRNA binding	TDRD7	IDA		Human	PMID:21436445
Molecular Function	GO:0005515	protein binding	TDRD7	IPI	UniProtKB:O75410	Human	PMID:14603251
Molecular Function	GO:0005515	protein binding	TDRD7	IPI	UniProtKB:O75410-1	Human	PMID:14603251
Molecular Function	GO:0005515	protein binding	TDRD7	IPI	UniProtKB:Q06547	Human	PMID:16189514
Molecular Function	GO:0005515	protein binding	TDRD7	IPI	UniProtKB:P42771	Human	PMID:21988832
Molecular Function	GO:0005515	protein binding	TDRD7	IPI	UniProtKB:Q06547	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	Tdrd7	IPI	PR:Q61496	Mouse	PMID:17141210
Molecular Function	GO:0005515	protein binding	Tdrd7	IPI	PR:P61407	Mouse	PMID:17141210
Molecular Function	GO:0005515	protein binding	Tdrd7	IPI	PR:Q8BVN9	Mouse	PMID:16787967
Molecular Function	GO:0005515	protein binding	Tdrd7	IPI	PR:Q99MV1	Mouse	PMID:17141210
Cellular Component	GO:0033391	chromatoid body	Tdrd7	IDA		Mouse	MGI:MGI:3695528|PMID:17141210
Cellular Component	GO:0005737	cytoplasm	Tdrd7	IDA		Mouse	MGI:MGI:3695528|PMID:17141210
Cellular Component	GO:0043186	P granule	Tdrd7	IDA		Mouse	PMID:17141210
Cellular Component	GO:0043186	P granule	tdrd7a	IDA		Zfish	PMID:18507824
Cellular Component	GO:1990904	ribonucleoprotein complex	Tdrd7	IDA		Mouse	PMID:17141210
Cellular Component	GO:0035770	ribonucleoprotein granule	TDRD7	IDA		Human	PMID:21436445
Biological Process	GO:0007281	germ cell development	Tdrd7	IDA		Mouse	PMID:17141210
Biological Process	GO:0070306	lens fiber cell differentiation	TDRD7	IMP		Human	PMID:21436445
Biological Process	GO:0070306	lens fiber cell differentiation	Tdrd7	IMP		Mouse	MGI:MGI:4943339|PMID:21436445
Biological Process	GO:0002089	lens morphogenesis in camera-type eye	TDRD7	IMP		Human	PMID:21436445
Biological Process	GO:0002089	lens morphogenesis in camera-type eye	Tdrd7	IMP		Mouse	MGI:MGI:4943339|PMID:21436445
Biological Process	GO:0030719	P granule organization	tdrd7a	IMP	ZFIN:ZDB-MRPHLNO-081029-2	Zfish	PMID:18507824
Biological Process	GO:0030719	P granule organization	tdrd7a	IMP	ZFIN:ZDB-MRPHLNO-081029-3	Zfish	PMID:18507824
Biological Process	GO:0010608	post-transcriptional regulation of gene expression	TDRD7	IMP		Human	PMID:21436445
Biological Process	GO:0007283	spermatogenesis	Tdrd7	IMP		Mouse	MGI:MGI:4943339|PMID:21436445

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern