Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes TBX15
  • Mouse genes Tbx15
  • Rat genes Tbx15
  • Zfish genes tbx15
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Tbx15

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0001227	DNA-binding transcription repressor activity, RNA polymerase II-specific	Tbx15	IDA		Mouse	MGI:MGI:3722519|PMID:17584735
Molecular Function	GO:0005515	protein binding	TBX15	IPI	UniProtKB:O95231	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	TBX15	IPI	UniProtKB:P54253	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	TBX15	IPI	UniProtKB:P56282	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	TBX15	IPI	UniProtKB:O95231	Human	PMID:31515488
Molecular Function	GO:0005515	protein binding	TBX15	IPI	UniProtKB:A8MV65-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TBX15	IPI	UniProtKB:O94955	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TBX15	IPI	UniProtKB:O95947	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TBX15	IPI	UniProtKB:P49639	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TBX15	IPI	UniProtKB:Q6PKX4	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TBX15	IPI	UniProtKB:Q86UW9	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TBX15	IPI	UniProtKB:Q8TDC0	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TBX15	IPI	UniProtKB:Q96HA8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TBX15	IPI	UniProtKB:Q96M29	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	Tbx15	IPI	PR:Q9EPZ6	Mouse	PMID:17584735
Molecular Function	GO:0042803	protein homodimerization activity	Tbx15	IPI	UniProtKB:O70306	Mouse	MGI:MGI:3722519|PMID:17584735
Molecular Function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Tbx15	IDA		Mouse	MGI:MGI:3722519|PMID:17584735
Molecular Function	GO:1990837	sequence-specific double-stranded DNA binding	TBX15	IDA		Human	PMID:28473536
Molecular Function	GO:0000976	transcription cis-regulatory region binding	Tbx15	IDA		Mouse	MGI:MGI:3722519|PMID:17584735
Cellular Component	GO:0005634	nucleus	Tbx15	IDA		Mouse	MGI:MGI:3722519|PMID:17584735
Cellular Component	GO:0090571	RNA polymerase II transcription repressor complex	Tbx15	IDA		Mouse	MGI:MGI:3722519|PMID:17584735
Biological Process	GO:0048701	embryonic cranial skeleton morphogenesis	Tbx15	IMP	MGI:MGI:1856015	Mouse	PMID:15728667
Biological Process	GO:0048704	embryonic skeletal system morphogenesis	Tbx15	IMP	MGI:MGI:1856015	Mouse	PMID:15728667
Biological Process	GO:0048704	embryonic skeletal system morphogenesis	Tbx15	IGI	MGI:MGI:95729	Mouse	PMID:15728667
Biological Process	GO:0000122	negative regulation of transcription by RNA polymerase II	Tbx15	IDA		Mouse	MGI:MGI:3722519|PMID:17584735

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern