Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes TAPT1
  • Mouse genes Tapt1
  • Rat genes Tapt1
  • Zfish genes tapt1a,tapt1b
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Tapt1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Cellular Component	GO:0005813	centrosome	TAPT1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005813	centrosome	TAPT1	IDA		Human	PMID:26365339
Cellular Component	GO:0036064	ciliary basal body	TAPT1	IDA		Human	PMID:26365339
Cellular Component	GO:0005829	cytosol	TAPT1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005654	nucleoplasm	TAPT1	IDA		Human	GO_REF:0000052
Biological Process	GO:0048856	anatomical structure development	Tapt1	IMP	MGI:MGI:1857317	Mouse	PMID:17151244
Biological Process	GO:1904888	cranial skeletal system development	tapt1b	IMP	ZFIN:ZDB-CRISPR-161026-1	Zfish	PMID:26365339
Biological Process	GO:1904888	cranial skeletal system development	tapt1b	IMP	ZFIN:ZDB-MRPHLNO-160106-9	Zfish	PMID:26365339
Biological Process	GO:1904888	cranial skeletal system development	tapt1b	IMP	ZFIN:ZDB-MRPHLNO-160106-8	Zfish	PMID:26365339
Biological Process	GO:0048706	embryonic skeletal system development	Tapt1	IMP	MGI:MGI:1857317	Mouse	PMID:17151244
Biological Process	GO:0014032	neural crest cell development	tapt1b	IMP		Zfish	PMID:26365339|ZFIN:ZDB-PUB-150916-17
Biological Process	GO:0001503	ossification	tapt1b	IMP	ZFIN:ZDB-MRPHLNO-160106-9	Zfish	PMID:26365339
Biological Process	GO:0001503	ossification	tapt1b	IMP	ZFIN:ZDB-MRPHLNO-160106-8	Zfish	PMID:26365339
Biological Process	GO:1903012	positive regulation of bone development	tapt1b	IMP		Zfish	PMID:26365339|ZFIN:ZDB-PUB-150916-17
Biological Process	GO:0061036	positive regulation of cartilage development	tapt1b	IMP		Zfish	PMID:26365339|ZFIN:ZDB-PUB-150916-17
Biological Process	GO:0045724	positive regulation of cilium assembly	TAPT1	IDA		Human	PMID:26365339
Biological Process	GO:0045724	positive regulation of cilium assembly	tapt1b	IMP		Zfish	PMID:26365339|ZFIN:ZDB-PUB-150916-17

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern