Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes TANC2
  • Mouse genes Tanc2
  • Rat genes Tanc2
  • Zfish genes tanc2a,tanc2b
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Tanc2

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	Tanc2	IPI	UniProtKB:F1M4A4	Rat	PMID:30021165|RGD:14995321
Molecular Function	GO:0005515	protein binding	Tanc2	IPI	UniProtKB:O08835|UniProtKB:P50232	Rat	PMID:30021165|RGD:14995321
Cellular Component	GO:0043197	dendritic spine	TANC2	IDA		Human	PMID:30021165
Cellular Component	GO:0043197	dendritic spine	Tanc2	IDA		Rat	PMID:30021165|RGD:14995321
Cellular Component	GO:0098978	glutamatergic synapse	Tanc2	IDA		Rat	PMID:21068316|RGD:11353167
Cellular Component	GO:0098978	glutamatergic synapse	Tanc2	IMP		Rat	PMID:21068316|RGD:11353167
Cellular Component	GO:0099092	postsynaptic density, intracellular component	Tanc2	IDA		Rat	PMID:21068316|RGD:11353167
Cellular Component	GO:0099092	postsynaptic density, intracellular component	Tanc2	IMP		Rat	PMID:21068316|RGD:11353167
Biological Process	GO:0099519	dense core granule cytoskeletal transport	Tanc2	IMP		Rat	PMID:30021165|RGD:14995321
Biological Process	GO:0001701	in utero embryonic development	Tanc2	IMP	MGI:MGI:4346764	Mouse	PMID:21068316
Biological Process	GO:0060998	regulation of dendritic spine development	Tanc2	IMP		Rat	PMID:30021165|RGD:14995321
Biological Process	GO:0061001	regulation of dendritic spine morphogenesis	Tanc2	IMP		Rat	PMID:30021165|RGD:14995321

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern