Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes TAFA1
  • Mouse genes Tafa1
  • Rat genes
  • Zfish genes tafa1a
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Tafa1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	TAFA1	IPI	UniProtKB:P53611	Human	PMID:25416956
Molecular Function	GO:0048018	receptor ligand activity	Tafa1	IDA		Mouse	MGI:MGI:6282980|PMID:29799787
Cellular Component	GO:0005783	endoplasmic reticulum	TAFA1	IDA		Human	GO_REF:0000054
Cellular Component	GO:0005615	extracellular space	TAFA1	IDA		Human	PMID:29453251
Cellular Component	GO:0005615	extracellular space	Tafa1	IDA		Mouse	MGI:MGI:6282980|PMID:29799787
Biological Process	GO:0014016	neuroblast differentiation	Tafa1	IDA		Mouse	MGI:MGI:6282980|PMID:29799787
Biological Process	GO:1902692	regulation of neuroblast proliferation	Tafa1	IDA		Mouse	MGI:MGI:6282980|PMID:29799787
Biological Process	GO:0010469	regulation of signaling receptor activity	Tafa1	IDA		Mouse	MGI:MGI:6282980|PMID:29799787

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern