About   Help   FAQ
Fam19a1 Gene Detail
Summary
  • Symbol
    Fam19a1
  • Name
    family with sequence similarity 19, member A1
  • Synonyms
    C630007B19Rik, Tafa-1
  • Feature Type
    protein coding gene
  • IDs
    MGI:2443695
    NCBI Gene: 320265
  • Alliance
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr6:96113154-96657198 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 6, 44.67 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    2544 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2443695
protein coding gene Chr6:96113154-96657208 (.)
129S1/SvImJ MGP_129S1SvImJ_G0031069
protein coding gene Chr6:97924630-98474153 (+)
A/J MGP_AJ_G0031038
protein coding gene Chr6:94211360-94751296 (+)
AKR/J MGP_AKRJ_G0030969
protein coding gene Chr6:96802645-97357961 (+)
BALB/cJ MGP_BALBcJ_G0031049
protein coding gene Chr6:94155334-94703968 (+)
C3H/HeJ MGP_C3HHeJ_G0030658
protein coding gene Chr6:87059693-87630299 (-)
C57BL/6NJ MGP_C57BL6NJ_G0031508
protein coding gene Chr6:100363783-100961220 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0028673
protein coding gene Chr6:92107589-92630022 (+)
CAST/EiJ MGP_CASTEiJ_G0030156
protein coding gene Chr6:97004313-97556756 (+)
CBA/J MGP_CBAJ_G0030735
protein coding gene Chr6:104181051-104777082 (+)
DBA/2J MGP_DBA2J_G0030888
protein coding gene Chr6:93358520-93888891 (+)
FVB/NJ MGP_FVBNJ_G0030842
protein coding gene Chr6:92545332-93079709 (+)
LP/J MGP_LPJ_G0030968
protein coding gene Chr6:97929545-98496383 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0030876
protein coding gene Chr6:108160245-108744250 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0031535
protein coding gene Chr6:96669483-97233202 (+)
PWK/PhJ MGP_PWKPhJ_G0029872
protein coding gene Chr6:92364607-92897988 (+)
SPRET/EiJ MGP_SPRETEiJ_G0029700
protein coding gene Chr6:95601082-96145285 (+)
WSB/EiJ MGP_WSBEiJ_G0030240
protein coding gene Chr6:97139198-97699570 (+)



Homology
more
  • Human Ortholog
    FAM19A1, family with sequence similarity 19 member A1, C-C motif chemokine like
  • Vertebrate Orthologs
    8
  • Human Ortholog
    FAM19A1, family with sequence similarity 19 member A1, C-C motif chemokine like
    Orthology source: HomoloGene, HGNC
  • Synonyms
    TAFA1, TAFA-1
  • Links
    NCBI Gene ID: 407738
    neXtProt AC: NX_Q7Z5A9
    UniProt: Q7Z5A9

  • Chr Location
    3p14.1; chr3:67991592-68546056 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    7 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000059187 Ensembl Gene Model | MGI Sequence Detail 544045 C57BL/6J ±  kb
transcript ENSMUST00000075080 Ensembl | MGI Sequence Detail 2411 Not Applicable  
polypeptide ENSMUSP00000074589 Ensembl | MGI Sequence Detail 133 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 4
    cDNA 4

    Microarray probesets 3
References
more
  • Summaries
    All 25
    Gene Ontology 2
    Phenotypes 7
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:105810 Akeson EC, et al., Chromosomal inversion discovered in C3H/HeJ mice. Genomics. 2006 Feb;87(2):311-3

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
11/13/2018
MGI 6.13
The Jackson Laboratory