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Fam19a1 Gene Detail
Summary
  • Symbol
    Fam19a1
  • Name
    family with sequence similarity 19, member A1
  • Synonyms
    C630007B19Rik, Tafa-1
  • Feature Type
    protein coding gene
  • IDs
    MGI:2443695
    NCBI Gene: 320265
Location & Maps
more
  • Sequence Map
    Chr6:96113154-96657198 bp, + strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      544045 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 6, 44.67 cM
  • Mapping Data
    1 experiment
Homology
more
  • Human Ortholog
    FAM19A1, family with sequence similarity 19 member A1, C-C motif chemokine like
  • Vertebrate Orthologs
    8
  • Human Ortholog
    FAM19A1, family with sequence similarity 19 member A1, C-C motif chemokine like
    Orthology source: HomoloGene, HGNC
  • Synonyms
    TAFA1, TAFA-1
  • Links
    NCBI Gene ID: 407738
    neXtProt AC: NX_Q7Z5A9

  • Chr Location
    3p14.1; chr3:67991592-68545621 (+)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    7 phenotype references
  • All Mutations and Alleles
    4
  • Gene trapped
    1
  • Spontaneous
    1
  • Targeted
    2
  • Genomic Mutations
    1 involving Fam19a1
  • Incidental Mutations
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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  • cDNA Data
  • Other Mouse Links
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000029712 VEGA Gene Model | MGI Sequence Detail 544045 C57BL/6J ±  kb
transcript OTTMUST00000073716 VEGA | MGI Sequence Detail 3252 Not Applicable  
polypeptide OTTMUSP00000038205 VEGA | MGI Sequence Detail 133 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    2544 from dbSNP Build 142
Protein
Information
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  • UniProt
    1 Sequence
  • Protein Ontology
    PR:000030989 protein FAM19A1
  • InterPro Domains
    IPR020350 Chemokine-like protein, FAM19A2
Molecular
Reagents
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  • All nucleic 4
    cDNA 4

    Microarray probesets 3
References
more
  • Summaries
    All 24
    Gene Ontology 2
    Phenotypes 7
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:90490 Tom Tang Y, et al., TAFA: a novel secreted family with conserved cysteine residues and restricted expression in the brain. Genomics. 2004 Apr;83(4):727-34

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
09/27/2016
MGI 6.05
The Jackson Laboratory