Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes TAF11
  • Mouse genes Taf11
  • Rat genes Taf11
  • Zfish genes taf11
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Taf11

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0003677	DNA binding	Taf11	IDA		Mouse	PMID:18722179
Molecular Function	GO:0046966	nuclear thyroid hormone receptor binding	TAF11	IPI	UniProtKB:P04625	Human	PMID:10744685
Molecular Function	GO:0042809	nuclear vitamin D receptor binding	TAF11	IPI	UniProtKB:P11473	Human	PMID:10744685
Molecular Function	GO:0005515	protein binding	TAF11	IPI	UniProtKB:Q92624	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	TAF11	IPI	UniProtKB:Q92624	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TAF11	IPI	UniProtKB:P20226	Human	PMID:7729427
Molecular Function	GO:0005515	protein binding	TAF11	IPI	UniProtKB:Q15543	Human	PMID:7729427
Molecular Function	GO:0005515	protein binding	TAF11	IPI	UniProtKB:Q16514	Human	PMID:7729427
Molecular Function	GO:0005515	protein binding	TAF11	IPI	UniProtKB:Q15542	Human	PMID:9045704
Molecular Function	GO:0005515	protein binding	TAF11	IPI	UniProtKB:Q15543	Human	PMID:9695952
Molecular Function	GO:0005515	protein binding	Taf11	IPI	UniProtKB:P61216	Mouse	MGI:MGI:4455093|PMID:20211142
Molecular Function	GO:0005515	protein binding	Taf11	IPI	UniProtKB:P61216	Mouse	MGI:MGI:3609918|PMID:11591653
Molecular Function	GO:0017025	TBP-class protein binding	TAF11	IPI	UniProtKB:P20226	Human	PMID:29111974
Molecular Function	GO:0003713	transcription coactivator activity	TAF11	IDA		Human	PMID:8670810
Cellular Component	GO:0005794	Golgi apparatus	TAF11	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005654	nucleoplasm	TAF11	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	TAF11	EXP		Human	PMID:23332750
Cellular Component	GO:0005634	nucleus	Taf11	IDA		Mouse	PMID:18722179
Cellular Component	GO:0005669	transcription factor TFIID complex	TAF11	IPI		Human	PMID:23332750
Cellular Component	GO:0005669	transcription factor TFIID complex	TAF11	IDA		Human	PMID:14580349
Cellular Component	GO:0005669	transcription factor TFIID complex	TAF11	IDA		Human	PMID:29111974
Cellular Component	GO:0005669	transcription factor TFIID complex	TAF11	IDA		Human	PMID:7729427
Cellular Component	GO:0005669	transcription factor TFIID complex	TAF11	IDA		Human	PMID:8670810
Biological Process	GO:0042789	mRNA transcription by RNA polymerase II	TAF11	IDA		Human	PMID:17884155
Biological Process	GO:0043923	positive regulation by host of viral transcription	TAF11	IDA		Human	PMID:9108034
Biological Process	GO:0060261	positive regulation of transcription initiation by RNA polymerase II	TAF11	IDA		Human	PMID:17884155
Biological Process	GO:0006468	protein phosphorylation	TAF11	IDA		Human	PMID:15053879
Biological Process	GO:0051123	RNA polymerase II preinitiation complex assembly	TAF11	IPI		Human	PMID:27007846

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern