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Taf11 Gene Detail
Summary
  • Symbol
    Taf11
  • Name
    TATA-box binding protein associated factor 11
  • Synonyms
    1110038O14Rik, 28kDa, PRO214, TAF2I, TAFII28
  • Feature Type
    protein coding gene
  • IDs
    MGI:1916026
    NCBI Gene: 68776
  • Gene Overview
    MyGene.info: TAF11
Location & Maps
more
  • Sequence Map
    Chr17:27901122-27909242 bp, - strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      8121 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 17, 14.60 cM
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    TAF11, TATA-box binding protein associated factor 11
  • Vertebrate Orthologs
    10
  • Human Ortholog
    TAF11, TATA-box binding protein associated factor 11
    Orthology source: HomoloGene, HGNC
  • Synonyms
    MGC:15243, PRO2134, TAF2I, TAFII28
  • Links
    NCBI Gene ID: 6882
    neXtProt AC: NX_Q15544

  • Chr Location
    6p21.31; chr6:34877778-34888071 (-)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    6 phenotype references
  • All Mutations and Alleles
    8
  • Gene trapped
    6
  • Targeted
    2
  • Incidental Mutations
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000024178 VEGA Gene Model | MGI Sequence Detail 8121 C57BL/6J ±  kb
transcript OTTMUST00000059155 VEGA | MGI Sequence Detail 2207 Not Applicable  
polypeptide OTTMUSP00000028748 VEGA | MGI Sequence Detail 211 Not Applicable  
For the selected sequence
Polymorphisms
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  • SNPs within 2kb
    78 from dbSNP Build 142
Protein
Information
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  • UniProt
    1 Sequence
  • Protein Ontology
    PR:000016016 transcription initiation factor TFIID subunit 11
  • InterPro Domains
    IPR009072 Histone-fold
    IPR006809 TAFII28-like protein
Molecular
Reagents
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  • All nucleic 63
    cDNA 63

    Microarray probesets 4
Other
Accession IDs
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MGI:2146796, MGI:2146964, MGI:2147086
References
more
  • Summaries
    All 38
    Developmental Gene Expression 5
    Gene Ontology 6
    Phenotypes 6
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:181994 Kamileri I, et al., Defective transcription initiation causes postnatal growth failure in a mouse model of nucleotide excision repair (NER) progeria. Proc Natl Acad Sci U S A. 2012 Feb 21;109(8):2995-3000

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
09/13/2016
MGI 6.05
The Jackson Laboratory