Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SYTL1
  • Mouse genes Sytl1
  • Rat genes Sytl1
  • Zfish genes si:ch211-266g18.6,sytl1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Sytl1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0042043	neurexin family protein binding	Sytl1	IDA		Mouse	MGI:MGI:1932155|PMID:11243866
Molecular Function	GO:0005515	protein binding	SYTL1	IPI	UniProtKB:P51159	Human	PMID:18266782
Molecular Function	GO:0005515	protein binding	SYTL1	IPI	UniProtKB:P51159	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	Sytl1	IPI	UniProtKB:Q9ERI2	Mouse	MGI:MGI:3852304|PMID:18266782
Molecular Function	GO:0005515	protein binding	Sytl1	IPI	UniProtKB:Q99N80	Mouse	MGI:MGI:3852304|PMID:18266782
Molecular Function	GO:0005515	protein binding	Sytl1	IPI	PR:Q9ERI2	Mouse	PMID:12590134
Cellular Component	GO:0070062	extracellular exosome	SYTL1	HDA		Human	PMID:23533145
Cellular Component	GO:0019897	extrinsic component of plasma membrane	Sytl1	IDA		Mouse	MGI:MGI:1932155|PMID:11243866
Cellular Component	GO:0042470	melanosome	Sytl1	IDA		Mouse	MGI:MGI:2176311|PMID:11773082
Cellular Component	GO:0016020	membrane	Sytl1	IDA		Mouse	PMID:11243866
Cellular Component	GO:0005886	plasma membrane	SYTL1	IDA		Human	PMID:18266782
Cellular Component	GO:0005886	plasma membrane	Sytl1	IDA		Mouse	MGI:MGI:3852304|PMID:18266782
Biological Process	GO:0006887	exocytosis	SYTL1	IDA		Human	PMID:18266782
Biological Process	GO:0006887	exocytosis	Sytl1	IDA		Mouse	MGI:MGI:3852304|PMID:18266782
Biological Process	GO:0016192	vesicle-mediated transport	Sytl1	IDA		Mouse	MGI:MGI:2176311|PMID:11773082

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern