Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SYNGR3
  • Mouse genes Syngr3
  • Rat genes Syngr3
  • Zfish genes syngr3a,syngr3b
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Syngr3

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	SYNGR3	IPI	UniProtKB:C9JCN9	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SYNGR3	IPI	UniProtKB:O60664	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SYNGR3	IPI	UniProtKB:P49638	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SYNGR3	IPI	UniProtKB:P53367	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SYNGR3	IPI	UniProtKB:Q00013	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SYNGR3	IPI	UniProtKB:Q05329	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SYNGR3	IPI	UniProtKB:Q08426	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SYNGR3	IPI	UniProtKB:Q504T8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SYNGR3	IPI	UniProtKB:Q96CM8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SYNGR3	IPI	UniProtKB:Q96T60	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SYNGR3	IPI	UniProtKB:Q9NZD8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SYNGR3	IPI	UniProtKB:Q9ULP0-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SYNGR3	IPI	UniProtKB:Q9Y371	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SYNGR3	IPI	UniProtKB:P17252	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	SYNGR3	IPI	UniProtKB:P61981	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	SYNGR3	IPI	UniProtKB:Q15047-2	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	SYNGR3	IPI	UniProtKB:Q8TAP4-4	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	SYNGR3	IPI	UniProtKB:Q92993	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	SYNGR3	IPI	UniProtKB:Q9Y371	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	Syngr3	IPI	UniProtKB:Q61327|UniProtKB:Q8BRU6	Mouse	MGI:MGI:3840716|PMID:19357284
Molecular Function	GO:0005515	protein binding	Syngr3	IPI	PR:Q62277	Mouse	PMID:18706977
Molecular Function	GO:0042169	SH2 domain binding	Syngr3	IDA		Mouse	PMID:18706977
Cellular Component	GO:0031594	neuromuscular junction	Syngr3	IDA		Mouse	PMID:14755516
Cellular Component	GO:0031594	neuromuscular junction	Syngr3	IEP		Mouse	PMID:14755516
Cellular Component	GO:0045202	synapse	Syngr3	IDA		Mouse	PMID:18706977
Cellular Component	GO:0008021	synaptic vesicle	Syngr3	IDA		Mouse	MGI:MGI:3840716|PMID:19357284
Cellular Component	GO:0008021	synaptic vesicle	Syngr3	IDA		Mouse	PMID:14755516
Cellular Component	GO:0008021	synaptic vesicle	Syngr3	IEP		Mouse	PMID:14755516
Biological Process	GO:0032411	positive regulation of transporter activity	Syngr3	IMP		Mouse	MGI:MGI:3840716|PMID:19357284
Biological Process	GO:0045055	regulated exocytosis	Syngr3	IMP		Mouse	MGI:MGI:1339882|PMID:10383386
Biological Process	GO:0051580	regulation of neurotransmitter uptake	Syngr3	IDA		Rat	PMID:19357284|RGD:13702442
Biological Process	GO:0051580	regulation of neurotransmitter uptake	Syngr3	IMP		Rat	PMID:19357284|RGD:13702442
Biological Process	GO:0021762	substantia nigra development	SYNGR3	HEP		Human	PMID:22926577

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern