Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SUMO3
  • Mouse genes Sumo3
  • Rat genes Sumo3
  • Zfish genes sumo3a,sumo3b
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Sumo3

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	SUMO3	IPI	UniProtKB:O43290	Human	PMID:17000644
Molecular Function	GO:0005515	protein binding	SUMO3	IPI	UniProtKB:P23497	Human	PMID:17000644
Molecular Function	GO:0005515	protein binding	SUMO3	IPI	UniProtKB:Q9HC62	Human	PMID:17099700
Molecular Function	GO:0005515	protein binding	SUMO3	IPI	UniProtKB:Q9UHP3	Human	PMID:18538659
Molecular Function	GO:0005515	protein binding	SUMO3	IPI	UniProtKB:Q5W0Q7	Human	PMID:22878415
Molecular Function	GO:0005515	protein binding	SUMO3	IPI	UniProtKB:Q5W0Q7	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SUMO3	IPI	UniProtKB:Q9HC62	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SUMO3	IPI	UniProtKB:P0DOE7	Human	PMID:25556234
Molecular Function	GO:0005515	protein binding	SUMO3	IPI	UniProtKB:O96006	Human	PMID:27068747
Molecular Function	GO:0005515	protein binding	SUMO3	IPI	UniProtKB:A4D161	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SUMO3	IPI	UniProtKB:O15060	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SUMO3	IPI	UniProtKB:Q6PEW1	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SUMO3	IPI	UniProtKB:Q86T24	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SUMO3	IPI	UniProtKB:Q96IT1	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SUMO3	IPI	UniProtKB:P42858	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	SUMO3	IPI	UniProtKB:P54253	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	SUMO3	IPI	UniProtKB:Q99700-5	Human	PMID:32814053
Molecular Function	GO:0019789	SUMO transferase activity	Sumo3	IDA		Mouse	PMID:18644859
Molecular Function	GO:0019789	SUMO transferase activity	Sumo3	IDA		Mouse	PMID:15767674
Cellular Component	GO:0016604	nuclear body	Sumo3	IDA		Mouse	PMID:18644859
Cellular Component	GO:0005634	nucleus	SUMO3	IDA		Human	PMID:21965678
Cellular Component	GO:0016605	PML body	SUMO3	IDA		Human	PMID:19050011
Cellular Component	GO:0016605	PML body	SUMO3	IDA		Human	PMID:27068747
Biological Process	GO:0043009	chordate embryonic development	sumo3a	IGI	ZFIN:ZDB-MRPHLNO-100415-7,ZFIN:ZDB-MRPHLNO-100415-8,ZFIN:ZDB-MRPHLNO-100415-9	Zfish	PMID:19704416
Biological Process	GO:0060216	definitive hemopoiesis	sumo3a	IGI	ZFIN:ZDB-MRPHLNO-100415-7,ZFIN:ZDB-MRPHLNO-100415-8,ZFIN:ZDB-MRPHLNO-100415-9	Zfish	PMID:25757417
Biological Process	GO:0060216	definitive hemopoiesis	sumo3a	IGI	ZFIN:ZDB-GENO-150618-12,ZFIN:ZDB-MRPHLNO-100415-7,ZFIN:ZDB-MRPHLNO-100415-8,ZFIN:ZDB-MRPHLNO-100415-9	Zfish	PMID:25757417
Biological Process	GO:0043392	negative regulation of DNA binding	SUMO3	IDA		Human	PMID:16626738
Biological Process	GO:2000060	positive regulation of ubiquitin-dependent protein catabolic process	Sumo3	IDA		Mouse	PMID:18644859
Biological Process	GO:0034504	protein localization to nucleus	Sumo3	IDA		Mouse	PMID:18644859
Biological Process	GO:0016925	protein sumoylation	SUMO3	IDA		Human	PMID:11889051
Biological Process	GO:0016925	protein sumoylation	SUMO3	IDA		Human	PMID:16626738
Biological Process	GO:0016925	protein sumoylation	SUMO3	IDA		Human	PMID:17696781
Biological Process	GO:0016925	protein sumoylation	SUMO3	IDA		Human	PMID:18538659
Biological Process	GO:0016925	protein sumoylation	SUMO3	IDA		Human	PMID:19050011
Biological Process	GO:0016925	protein sumoylation	SUMO3	IDA		Human	PMID:21965678
Biological Process	GO:0016925	protein sumoylation	SUMO3	IDA		Human	PMID:24105744
Biological Process	GO:0016925	protein sumoylation	SUMO3	IDA		Human	PMID:27068747
Biological Process	GO:0016925	protein sumoylation	Sumo3	IDA		Mouse	PMID:18644859
Biological Process	GO:0016925	protein sumoylation	Sumo3	IDA		Mouse	PMID:15767674
Biological Process	GO:1900180	regulation of protein localization to nucleus	SUMO3	IDA		Human	PMID:19050011

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern