Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SPATA7
  • Mouse genes Spata7
  • Rat genes Spata7
  • Zfish genes spata7
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Spata7

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	SPATA7	IPI	UniProtKB:Q96KN7	Human	PMID:25398945
Molecular Function	GO:0005515	protein binding	Spata7	IPI	MGI:MGI:1932134	Mouse	PMID:29899041
Molecular Function	GO:0005515	protein binding	Spata7	IPI	MGI:MGI:1858233	Mouse	PMID:29899041
Molecular Function	GO:0005515	protein binding	Spata7	IPI	MGI:MGI:87971	Mouse	PMID:29899041
Molecular Function	GO:0005515	protein binding	Spata7	IPI	MGI:MGI:1344037	Mouse	PMID:29899041
Molecular Function	GO:0005515	protein binding	Spata7	IPI	MGI:MGI:2384210	Mouse	PMID:29899041
Cellular Component	GO:0005930	axoneme	SPATA7	IDA		Human	PMID:25398945
Cellular Component	GO:0036064	ciliary basal body	SPATA7	IDA		Human	PMID:25398945
Cellular Component	GO:0005829	cytosol	SPATA7	IDA		Human	GO_REF:0000052
Cellular Component	GO:0015630	microtubule cytoskeleton	SPATA7	IDA		Human	PMID:25398945
Cellular Component	GO:0032391	photoreceptor connecting cilium	Spata7	IDA		Mouse	MGI:MGI:5608598|PMID:25398945
Cellular Component	GO:0120206	photoreceptor distal connecting cilium	Spata7	IDA		Mouse	PMID:29899041
Cellular Component	GO:0120206	photoreceptor distal connecting cilium	Spata7	IMP	MGI:5660490	Mouse	PMID:29899041
Cellular Component	GO:0120200	rod photoreceptor outer segment	Spata7	IMP	MGI:5660490	Mouse	PMID:29899041
Cellular Component	GO:0120200	rod photoreceptor outer segment	Spata7	IGI	MGI:MGI:2384917	Mouse	PMID:29899041
Biological Process	GO:0000226	microtubule cytoskeleton organization	Spata7	IGI	MGI:MGI:2384917	Mouse	PMID:29899041
Biological Process	GO:0000226	microtubule cytoskeleton organization	Spata7	IMP	MGI:5660490	Mouse	PMID:29899041
Biological Process	GO:0045494	photoreceptor cell maintenance	Spata7	IMP		Mouse	MGI:MGI:5608598|PMID:25398945
Biological Process	GO:1903621	protein localization to photoreceptor connecting cilium	Spata7	IMP		Mouse	MGI:MGI:5608598|PMID:25398945
Biological Process	GO:1903621	protein localization to photoreceptor connecting cilium	Spata7	IMP	MGI:5660490	Mouse	PMID:29899041
Biological Process	GO:1903546	protein localization to photoreceptor outer segment	Spata7	IMP		Mouse	MGI:MGI:5608598|PMID:25398945
Biological Process	GO:0007283	spermatogenesis	Spata7	IEP		Rat	PMID:12736779|RGD:1302279

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern