Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SPATA13
  • Mouse genes Spata13
  • Rat genes Spata13
  • Zfish genes spata13
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Spata13

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005085	guanyl-nucleotide exchange factor activity	SPATA13	IMP		Human	PMID:17145773
Molecular Function	GO:0005085	guanyl-nucleotide exchange factor activity	SPATA13	IMP		Human	PMID:17599059
Molecular Function	GO:0005085	guanyl-nucleotide exchange factor activity	SPATA13	IDA		Human	PMID:19934221
Molecular Function	GO:0005515	protein binding	SPATA13	IPI	UniProtKB:P25054	Human	PMID:17145773
Molecular Function	GO:0005515	protein binding	SPATA13	IPI	UniProtKB:P63000	Human	PMID:17145773
Molecular Function	GO:0005515	protein binding	SPATA13	IPI	UniProtKB:P25054	Human	PMID:17599059
Molecular Function	GO:0005515	protein binding	SPATA13	IPI	UniProtKB:Q96SB3	Human	PMID:19151759
Cellular Component	GO:0005737	cytoplasm	SPATA13	IDA		Human	PMID:19151759
Cellular Component	GO:0005829	cytosol	SPATA13	IDA		Human	GO_REF:0000052
Cellular Component	GO:0030175	filopodium	SPATA13	IDA		Human	PMID:17599059
Cellular Component	GO:0030027	lamellipodium	SPATA13	IDA		Human	PMID:17599059
Cellular Component	GO:0030027	lamellipodium	SPATA13	IDA		Human	PMID:19151759
Cellular Component	GO:0005654	nucleoplasm	SPATA13	IDA		Human	GO_REF:0000052
Cellular Component	GO:0032587	ruffle membrane	SPATA13	IDA		Human	PMID:19151759
Biological Process	GO:0016477	cell migration	SPATA13	IMP		Human	PMID:17145773
Biological Process	GO:0016477	cell migration	SPATA13	IMP		Human	PMID:19151759
Biological Process	GO:0046847	filopodium assembly	SPATA13	IMP		Human	PMID:17145773
Biological Process	GO:0046847	filopodium assembly	SPATA13	IMP		Human	PMID:17599059
Biological Process	GO:0030032	lamellipodium assembly	SPATA13	IMP		Human	PMID:17599059
Biological Process	GO:0030334	regulation of cell migration	SPATA13	IMP		Human	PMID:17599059
Biological Process	GO:0030334	regulation of cell migration	SPATA13	IMP		Human	PMID:19934221

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern