Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SNX17
  • Mouse genes Snx17
  • Rat genes Snx17
  • Zfish genes snx17
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Snx17

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0050750	low-density lipoprotein particle receptor binding	SNX17	IDA		Human	PMID:12169628
Molecular Function	GO:0035091	phosphatidylinositol binding	SNX17	IDA		Human	PMID:16712798
Molecular Function	GO:0005515	protein binding	SNX17	IPI	UniProtKB:P16109	Human	PMID:11237770
Molecular Function	GO:0005515	protein binding	SNX17	IPI	UniProtKB:Q6S5J6	Human	PMID:16712798
Molecular Function	GO:0005515	protein binding	SNX17	IPI	UniProtKB:P16333	Human	PMID:17474147
Molecular Function	GO:0005515	protein binding	SNX17	IPI	UniProtKB:P19174	Human	PMID:17474147
Molecular Function	GO:0005515	protein binding	SNX17	IPI	UniProtKB:O14972|UniProtKB:O60826|UniProtKB:Q567U6|UniProtKB:Q7Z3J2	Human	PMID:28892079
Molecular Function	GO:0005515	protein binding	SNX17	IPI	UniProtKB:P31273	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SNX17	IPI	UniProtKB:Q13671	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SNX17	IPI	UniProtKB:Q8TEB7	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SNX17	IPI	UniProtKB:Q9UI14	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SNX17	IPI	UniProtKB:P05067	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	Snx17	IPI	PR:Q924X6	Mouse	PMID:12169628
Molecular Function	GO:0005515	protein binding	Snx17	IPI	MGI:MGI:96765	Mouse	PMID:12169628
Cellular Component	GO:0005737	cytoplasm	Snx17	IDA		Mouse	PMID:12169628
Cellular Component	GO:0031410	cytoplasmic vesicle	SNX17	IDA		Human	PMID:16712798
Cellular Component	GO:0005829	cytosol	SNX17	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005829	cytosol	SNX17	IDA		Human	PMID:16712798
Cellular Component	GO:0005769	early endosome	SNX17	IDA		Human	PMID:12169628
Cellular Component	GO:0005768	endosome	SNX17	IDA		Human	PMID:23382219
Cellular Component	GO:0005768	endosome	SNX17	IDA		Human	PMID:28892079
Cellular Component	GO:0005768	endosome	Snx17	IPI	PR:P35951	Mouse	PMID:12169628
Cellular Component	GO:0010008	endosome membrane	SNX17	IDA		Human	PMID:23382219
Cellular Component	GO:0005794	Golgi apparatus	SNX17	IDA		Human	PMID:10942595
Cellular Component	GO:0043231	intracellular membrane-bounded organelle	SNX17	IDA		Human	GO_REF:0000052
Cellular Component	GO:0032991	protein-containing complex	SNX17	IDA		Human	PMID:23382219
Biological Process	GO:0035904	aorta development	Snx17	IMP		Mouse	PMID:25807483
Biological Process	GO:0003279	cardiac septum development	Snx17	IMP		Mouse	PMID:25807483
Biological Process	GO:0060976	coronary vasculature development	Snx17	IMP		Mouse	PMID:25807483
Biological Process	GO:0032456	endocytic recycling	SNX17	IMP		Human	PMID:28892079
Biological Process	GO:0001822	kidney development	Snx17	IMP	MGI:MGI:5489924	Mouse	PMID:27002738
Biological Process	GO:0006898	receptor-mediated endocytosis	Snx17	IDA		Mouse	PMID:12169628

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern