Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SNRNP70
  • Mouse genes Snrnp70
  • Rat genes Snrnp70
  • Zfish genes snrnp70
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Snrnp70

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	SNRNP70	IPI	UniProtKB:P31483	Human	PMID:12486009
Molecular Function	GO:0005515	protein binding	SNRNP70	IPI	UniProtKB:O43809	Human	PMID:14561889
Molecular Function	GO:0005515	protein binding	SNRNP70	IPI	UniProtKB:Q16630	Human	PMID:14561889
Molecular Function	GO:0005515	protein binding	SNRNP70	IPI	UniProtKB:Q07955	Human	PMID:18559666
Molecular Function	GO:0005515	protein binding	SNRNP70	IPI	UniProtKB:P52756	Human	PMID:18951082
Molecular Function	GO:0005515	protein binding	SNRNP70	IPI	UniProtKB:Q16637	Human	PMID:19928837
Molecular Function	GO:0005515	protein binding	SNRNP70	IPI	UniProtKB:P49760	Human	PMID:21988832
Molecular Function	GO:0005515	protein binding	SNRNP70	IPI	UniProtKB:P78362	Human	PMID:22365833
Molecular Function	GO:0005515	protein binding	SNRNP70	IPI	UniProtKB:P78362	Human	PMID:23602568
Molecular Function	GO:0005515	protein binding	SNRNP70	IPI	UniProtKB:Q96SB4	Human	PMID:23602568
Molecular Function	GO:0005515	protein binding	SNRNP70	IPI	UniProtKB:P52298,UniProtKB:Q09161	Human	PMID:23793891
Molecular Function	GO:0005515	protein binding	SNRNP70	IPI	UniProtKB:Q16637	Human	PMID:24981860
Molecular Function	GO:0005515	protein binding	SNRNP70	IPI	UniProtKB:P11142	Human	PMID:25719862
Molecular Function	GO:0005515	protein binding	SNRNP70	IPI	UniProtKB:P35637	Human	PMID:26124092
Molecular Function	GO:0005515	protein binding	SNRNP70	IPI	UniProtKB:Q16637	Human	PMID:26828962
Molecular Function	GO:0005515	protein binding	SNRNP70	IPI	UniProtKB:A7MD48	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SNRNP70	IPI	UniProtKB:P49760	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SNRNP70	IPI	UniProtKB:Q9BX10	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SNRNP70	IPI	UniProtKB:P78362	Human	PMID:32707033
Molecular Function	GO:0005515	protein binding	SNRNP70	IPI	UniProtKB:Q96SB4	Human	PMID:32707033
Molecular Function	GO:0005515	protein binding	SNRNP70	IPI	UniProtKB:Q99590	Human	PMID:9447963
Molecular Function	GO:0003723	RNA binding	SNRNP70	HDA		Human	PMID:22658674
Molecular Function	GO:0003723	RNA binding	SNRNP70	HDA		Human	PMID:22681889
Molecular Function	GO:0003723	RNA binding	SNRNP70	IMP		Human	PMID:2467746
Molecular Function	GO:0030619	U1 snRNA binding	SNRNP70	IDA		Human	PMID:21113136
Molecular Function	GO:0030619	U1 snRNA binding	SNRNP70	IDA		Human	PMID:25555158
Molecular Function	GO:1990446	U1 snRNP binding	Snrnp70	IDA		Rat	PMID:16502463|RGD:10448962
Cellular Component	GO:0005737	cytoplasm	Snrnp70	IDA		Rat	PMID:10022522|RGD:10448942
Cellular Component	GO:0016607	nuclear speck	Snrnp70	IDA		Mouse	MGI:MGI:3770352|PMID:17656373
Cellular Component	GO:0005654	nucleoplasm	SNRNP70	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	SNRNP70	IDA		Human	PMID:18559850
Cellular Component	GO:0005634	nucleus	SNRNP70	IDA		Human	PMID:21113136
Cellular Component	GO:0005634	nucleus	Snrnp70	IDA		Rat	PMID:10022522|RGD:10448942
Cellular Component	GO:0005681	spliceosomal complex	SNRNP70	IPI		Human	PMID:33677607
Cellular Component	GO:0005681	spliceosomal complex	SNRNP70	IDA		Human	PMID:9531537
Cellular Component	GO:0005681	spliceosomal complex	SNRNP70	IDA		Human	PMID:9731529
Cellular Component	GO:0005685	U1 snRNP	SNRNP70	IPI		Human	PMID:33677607
Cellular Component	GO:0005685	U1 snRNP	SNRNP70	IDA		Human	PMID:21113136
Cellular Component	GO:0005685	U1 snRNP	SNRNP70	IDA		Human	PMID:23793891
Cellular Component	GO:0005685	U1 snRNP	SNRNP70	IDA		Human	PMID:25555158
Cellular Component	GO:0005685	U1 snRNP	Snrnp70	IDA		Rat	PMID:16502463|RGD:10448962
Biological Process	GO:0071300	cellular response to retinoic acid	Snrnp70	IEP		Rat	PMID:10022522|RGD:10448942
Biological Process	GO:0071560	cellular response to transforming growth factor beta stimulus	Snrnp70	IEP		Rat	PMID:10022522|RGD:10448942
Biological Process	GO:0071356	cellular response to tumor necrosis factor	Snrnp70	IEP		Rat	PMID:10022522|RGD:10448942
Biological Process	GO:0060218	hematopoietic stem cell differentiation	snrnp70	IMP	ZFIN:ZDB-GENO-090730-9	Zfish	PMID:19332767
Biological Process	GO:0000398	mRNA splicing, via spliceosome	SNRNP70	IDA		Human	PMID:9531537
Biological Process	GO:0048026	positive regulation of mRNA splicing, via spliceosome	Snrnp70	IMP		Mouse	PMID:23636947
Biological Process	GO:0043484	regulation of RNA splicing	SNRNP70	IMP		Human	PMID:2467746

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern