Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SNCAIP
  • Mouse genes Sncaip
  • Rat genes Sncaip
  • Zfish genes sncaip
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Sncaip

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0042802	identical protein binding	SNCAIP	IPI	UniProtKB:Q9Y6H5	Human	PMID:19762560
Molecular Function	GO:0005515	protein binding	SNCAIP	IPI	UniProtKB:P37840	Human	PMID:10319874
Molecular Function	GO:0005515	protein binding	SNCAIP	IPI	UniProtKB:O60260	Human	PMID:11590439
Molecular Function	GO:0005515	protein binding	SNCAIP	IPI	UniProtKB:P37840	Human	PMID:11956199
Molecular Function	GO:0005515	protein binding	SNCAIP	IPI	UniProtKB:P37840	Human	PMID:12044636
Molecular Function	GO:0005515	protein binding	SNCAIP	IPI	UniProtKB:O60260	Human	PMID:12364339
Molecular Function	GO:0005515	protein binding	SNCAIP	IPI	UniProtKB:P37840	Human	PMID:19762560
Molecular Function	GO:0031625	ubiquitin protein ligase binding	SNCAIP	IPI	UniProtKB:O60260	Human	PMID:15728840
Cellular Component	GO:0005737	cytoplasm	SNCAIP	IDA		Human	PMID:14506261
Cellular Component	GO:0036464	cytoplasmic ribonucleoprotein granule	SNCAIP	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005654	nucleoplasm	SNCAIP	IDA		Human	GO_REF:0000052
Biological Process	GO:0008219	cell death	SNCAIP	IDA		Human	PMID:16595633
Biological Process	GO:0042417	dopamine metabolic process	SNCAIP	IDA		Human	PMID:14506261
Biological Process	GO:0090083	regulation of inclusion body assembly	SNCAIP	IDA		Human	PMID:15603737
Biological Process	GO:0046928	regulation of neurotransmitter secretion	SNCAIP	IDA		Human	PMID:14506261

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern