Comparative GO Graph (mouse, human, rat)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SLITRK1
  • Mouse genes Slitrk1
  • Rat genes Slitrk1
  • Zfish genes
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Slitrk1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	SLITRK1	IPI	UniProtKB:P27348|UniProtKB:P31946|UniProtKB:P31947|UniProtKB:P61981|UniProtKB:P62258|UniProtKB:Q04917	Human	PMID:19640509
Molecular Function	GO:0005515	protein binding	SLITRK1	IPI	UniProtKB:Q9UHD9	Human	PMID:32296183
Cellular Component	GO:0098982	GABA-ergic synapse	SLITRK1	IDA		Human	PMID:23345436
Cellular Component	GO:0098982	GABA-ergic synapse	SLITRK1	IMP		Human	PMID:23345436
Cellular Component	GO:0098982	GABA-ergic synapse	Slitrk1	IDA		Rat	PMID:27273464|RGD:13702200
Cellular Component	GO:0098982	GABA-ergic synapse	Slitrk1	IMP		Rat	PMID:27273464|RGD:13702200
Cellular Component	GO:0098978	glutamatergic synapse	SLITRK1	IDA		Human	PMID:23345436
Cellular Component	GO:0098978	glutamatergic synapse	SLITRK1	IMP		Human	PMID:23345436
Cellular Component	GO:0098978	glutamatergic synapse	Slitrk1	IDA		Mouse	PMID:27273464
Cellular Component	GO:0098978	glutamatergic synapse	Slitrk1	IEP		Mouse	PMID:27273464
Cellular Component	GO:0098978	glutamatergic synapse	Slitrk1	IDA		Rat	PMID:27273464|RGD:13702200
Cellular Component	GO:0098978	glutamatergic synapse	Slitrk1	IMP		Rat	PMID:27273464|RGD:13702200
Cellular Component	GO:0098839	postsynaptic density membrane	Slitrk1	IDA		Mouse	PMID:27273464
Cellular Component	GO:0098839	postsynaptic density membrane	Slitrk1	IEP		Mouse	PMID:27273464
Cellular Component	GO:0098839	postsynaptic density membrane	Slitrk1	IDA		Rat	PMID:23345436|RGD:13702165
Cellular Component	GO:0045202	synapse	Slitrk1	IDA		Mouse	MGI:MGI:5819326|PMID:27273464
Biological Process	GO:0030534	adult behavior	Slitrk1	IMP	MGI:MGI:3834477	Mouse	PMID:18794888
Biological Process	GO:0007409	axonogenesis	Slitrk1	IDA		Mouse	PMID:14550773
Biological Process	GO:0042592	homeostatic process	Slitrk1	IMP	MGI:MGI:3834477	Mouse	PMID:18794888
Biological Process	GO:0035264	multicellular organism growth	Slitrk1	IMP	MGI:MGI:3834477	Mouse	PMID:18794888
Biological Process	GO:0007399	nervous system development	Slitrk1	IMP	MGI:MGI:3834477	Mouse	PMID:18794888
Biological Process	GO:0050772	positive regulation of axonogenesis	SLITRK1	IMP		Human	PMID:23990902
Biological Process	GO:0051965	positive regulation of synapse assembly	Slitrk1	IDA		Mouse	PMID:24613359
Biological Process	GO:1905606	regulation of presynapse assembly	SLITRK1	IDA		Human	PMID:23345436
Biological Process	GO:1905606	regulation of presynapse assembly	SLITRK1	IMP		Human	PMID:23345436
Biological Process	GO:0050807	regulation of synapse organization	Slitrk1	IDA		Rat	PMID:27273464|RGD:13702200
Biological Process	GO:0050807	regulation of synapse organization	Slitrk1	IMP		Rat	PMID:27273464|RGD:13702200
Biological Process	GO:0007416	synapse assembly	SLITRK1	IMP		Human	PMID:27273464
Biological Process	GO:0099560	synaptic membrane adhesion	SLITRK1	IDA		Human	PMID:23345436
Biological Process	GO:0099560	synaptic membrane adhesion	SLITRK1	IMP		Human	PMID:23345436

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern