Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SLC6A17
  • Mouse genes Slc6a17
  • Rat genes Slc6a17
  • Zfish genes slc6a17
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Slc6a17

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	SLC6A17	IPI	UniProtKB:Q12983	Human	PMID:32296183
Cellular Component	GO:0098982	GABA-ergic synapse	Slc6a17	IDA		Rat	PMID:10103130|RGD:13702218
Cellular Component	GO:0098978	glutamatergic synapse	Slc6a17	IDA		Rat	PMID:10103130|RGD:13702218
Cellular Component	GO:0045202	synapse	Slc6a17	IDA		Rat	PMID:19147495|RGD:8554196
Cellular Component	GO:0045202	synapse	Slc6a17	IMP		Rat	PMID:19147495|RGD:8554196
Cellular Component	GO:0008021	synaptic vesicle	Slc6a17	IDA		Rat	PMID:18768736|RGD:8553691
Cellular Component	GO:0008021	synaptic vesicle	Slc6a17	IDA		Rat	PMID:19147495|RGD:8554196
Cellular Component	GO:0030672	synaptic vesicle membrane	Slc6a17	IDA		Rat	PMID:10103130|RGD:13702218
Biological Process	GO:0032328	alanine transport	Slc6a17	IDA		Rat	PMID:18768736|RGD:8553691
Biological Process	GO:0007420	brain development	Slc6a17	IDA		Mouse	MGI:MGI:5634854|PMID:25704603
Biological Process	GO:0015816	glycine transport	Slc6a17	IDA		Rat	PMID:18768736|RGD:8553691
Biological Process	GO:0015820	leucine transport	Slc6a17	IDA		Rat	PMID:18768736|RGD:8553691
Biological Process	GO:0015804	neutral amino acid transport	Slc6a17	IDA		Rat	PMID:19147495|RGD:8554196
Biological Process	GO:0015824	proline transport	Slc6a17	IDA		Rat	PMID:18768736|RGD:8553691
Biological Process	GO:0015824	proline transport	Slc6a17	IDA		Rat	PMID:19147495|RGD:8554196
Biological Process	GO:0030163	protein catabolic process	Slc6a17	IDA		Rat	PMID:19147495|RGD:8554196
Biological Process	GO:0030163	protein catabolic process	Slc6a17	IMP		Rat	PMID:19147495|RGD:8554196

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern