Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SLC30A9
  • Mouse genes Slc30a9
  • Rat genes Slc30a9
  • Zfish genes slc30a9
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Slc30a9

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0003682	chromatin binding	Slc30a9	IDA		Mouse	PMID:15988012
Molecular Function	GO:0016922	nuclear receptor binding	Slc30a9	IPI	PR:Q61026	Mouse	PMID:15988012
Molecular Function	GO:0016922	nuclear receptor binding	Slc30a9	IPI	PR:P19091	Mouse	PMID:15988012
Molecular Function	GO:0016922	nuclear receptor binding	Slc30a9	IPI	PR:P19785	Mouse	PMID:15988012
Molecular Function	GO:0030374	nuclear receptor coactivator activity	Slc30a9	IGI	MGI:MGI:1352467	Mouse	PMID:15988012
Molecular Function	GO:0030374	nuclear receptor coactivator activity	Slc30a9	IGI	MGI:MGI:1276533	Mouse	PMID:15988012
Molecular Function	GO:0005385	zinc ion transmembrane transporter activity	SLC30A9	IDA		Human	PMID:34716203
Cellular Component	GO:0031410	cytoplasmic vesicle	SLC30A9	IDA		Human	PMID:28334855
Cellular Component	GO:0005856	cytoskeleton	SLC30A9	IDA		Human	PMID:10409434
Cellular Component	GO:0005783	endoplasmic reticulum	SLC30A9	IDA		Human	PMID:28334855
Cellular Component	GO:0031966	mitochondrial membrane	SLC30A9	IDA		Human	PMID:34716203
Cellular Component	GO:0005634	nucleus	SLC30A9	IDA		Human	PMID:10409434
Biological Process	GO:0006351	DNA-templated transcription	Slc30a9	IGI	MGI:MGI:1352467	Mouse	MGI:MGI:3581989|PMID:15988012
Biological Process	GO:0006882	intracellular zinc ion homeostasis	SLC30A9	IMP		Human	PMID:28334855
Biological Process	GO:0045893	positive regulation of DNA-templated transcription	Slc30a9	IGI	MGI:MGI:1352467	Mouse	MGI:MGI:3581989|PMID:15988012
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	Slc30a9	IDA		Mouse	PMID:15988012
Biological Process	GO:0010821	regulation of mitochondrion organization	SLC30A9	IDA		Human	PMID:34716203
Biological Process	GO:0006829	zinc ion transport	SLC30A9	IMP		Human	PMID:28334855

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern