Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SIN3B
  • Mouse genes Sin3b
  • Rat genes Sin3b
  • Zfish genes sin3b
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Sin3b

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0003682	chromatin binding	Sin3b	IDA		Mouse	PMID:16103876
Molecular Function	GO:0005515	protein binding	SIN3B	IPI	UniProtKB:P51610	Human	PMID:12670868
Molecular Function	GO:0005515	protein binding	SIN3B	IPI	UniProtKB:Q9P1Z0	Human	PMID:18451802
Molecular Function	GO:0005515	protein binding	SIN3B	IPI	UniProtKB:Q6UWU4	Human	PMID:23460338
Molecular Function	GO:0005515	protein binding	SIN3B	IPI	UniProtKB:P01106	Human	PMID:24951594
Molecular Function	GO:0005515	protein binding	Sin3b	IPI	UniProtKB:P97784	Mouse	MGI:MGI:5567917|PMID:15226430
Molecular Function	GO:0005515	protein binding	Sin3b	IPI	UniProtKB:Q6PDX6	Mouse	MGI:MGI:4820696|PMID:20170641
Molecular Function	GO:0005515	protein binding	Sin3b	IPI	UniProtKB:P97500	Mouse	MGI:MGI:5897487|PMID:28379941
Molecular Function	GO:0005515	protein binding	Sin3b	IPI	UniProtKB:O88574	Mouse	MGI:MGI:1929573|PMID:9702189
Molecular Function	GO:0005515	protein binding	Sin3b	IPI	UniProtKB:P42128-1|UniProtKB:P42128-2	Mouse	MGI:MGI:3687784|PMID:10620510
Molecular Function	GO:0005515	protein binding	Sin3b	IPI	UniProtKB:Q8BVN9	Mouse	MGI:MGI:3655410|PMID:16787967
Molecular Function	GO:0005515	protein binding	Sin3b	IPI	UniProtKB:P42128	Mouse	MGI:MGI:3687784|PMID:10620510
Molecular Function	GO:0005515	protein binding	Sin3b	IPI	UniProtKB:P42128	Mouse	MGI:MGI:5487501|PMID:22476904
Molecular Function	GO:0005515	protein binding	Sin3b	IPI	UniProtKB:Q8BR65	Mouse	MGI:MGI:2670031|PMID:11909966
Molecular Function	GO:0005515	protein binding	Sin3b	IPI	UniProtKB:P01106	Mouse	MGI:MGI:5634875|PMID:24951594
Molecular Function	GO:0005515	protein binding	Sin3b	IPI	PR:O09106	Mouse	PMID:16103876
Molecular Function	GO:0005515	protein binding	Sin3b	IPI	PR:O08789	Mouse	PMID:16103876
Molecular Function	GO:0005515	protein binding	Sin3b	IPI	PR:Q60948	Mouse	PMID:8521822
Molecular Function	GO:0005515	protein binding	Sin3b	IPI	PR:Q80US8	Mouse	PMID:8521822
Molecular Function	GO:0005515	protein binding	Sin3b	IPI	PR:Q8BR65	Mouse	PMID:15489224
Molecular Function	GO:0003714	transcription corepressor activity	Sin3b	IDA		Mouse	MGI:MGI:79975|PMID:7889570
Cellular Component	GO:0030849	autosome	Sin3b	IDA		Mouse	PMID:16787967
Cellular Component	GO:0005737	cytoplasm	Sin3b	IDA		Mouse	MGI:MGI:3687784|PMID:10620510
Cellular Component	GO:0005737	cytoplasm	Sin3b	IDA		Mouse	PMID:16787967
Cellular Component	GO:0005634	nucleus	Sin3b	IDA		Mouse	MGI:MGI:79478|PMID:8649810
Cellular Component	GO:0005634	nucleus	Sin3b	IDA		Mouse	MGI:MGI:3687784|PMID:10620510
Cellular Component	GO:0005634	nucleus	Sin3b	IDA		Mouse	MGI:MGI:4820696|PMID:20170641
Cellular Component	GO:0000805	X chromosome	Sin3b	IDA		Mouse	PMID:16787967
Cellular Component	GO:0001741	XY body	Sin3b	IDA		Mouse	PMID:16787967
Cellular Component	GO:0000806	Y chromosome	Sin3b	IDA		Mouse	PMID:16787967
Biological Process	GO:0048738	cardiac muscle tissue development	Sin3b	IDA		Mouse	MGI:MGI:3687784|PMID:10620510
Biological Process	GO:0045892	negative regulation of DNA-templated transcription	Sin3b	IDA		Mouse	MGI:MGI:79975|PMID:7889570
Biological Process	GO:0043931	ossification involved in bone maturation	sin3b	IMP	ZFIN:ZDB-GENO-180322-7	Zfish	PMID:28850761
Biological Process	GO:0007519	skeletal muscle tissue development	Sin3b	IDA		Mouse	MGI:MGI:3687784|PMID:10620510
Biological Process	GO:0036269	swimming behavior	sin3b	IMP	ZFIN:ZDB-GENO-180322-7	Zfish	PMID:28850761

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern