Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SFMBT1
  • Mouse genes Sfmbt1
  • Rat genes Sfmbt1
  • Zfish genes sfmbt1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Sfmbt1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0042393	histone binding	SFMBT1	IDA		Human	PMID:17599839
Molecular Function	GO:0042393	histone binding	SFMBT1	IDA		Human	PMID:23592795
Molecular Function	GO:0005515	protein binding	SFMBT1	IPI	UniProtKB:Q8IXK0	Human	PMID:16189514
Molecular Function	GO:0005515	protein binding	SFMBT1	IPI	UniProtKB:Q16695	Human	PMID:17599839
Molecular Function	GO:0005515	protein binding	SFMBT1	IPI	UniProtKB:O60341	Human	PMID:23592795
Molecular Function	GO:0005515	protein binding	SFMBT1	IPI	UniProtKB:Q9UKL0	Human	PMID:23592795
Molecular Function	GO:0005515	protein binding	SFMBT1	IPI	UniProtKB:Q8IXK0	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SFMBT1	IPI	UniProtKB:Q8TBK6	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SFMBT1	IPI	UniProtKB:P17482	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SFMBT1	IPI	UniProtKB:Q5MJ10	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SFMBT1	IPI	UniProtKB:Q7L5A3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SFMBT1	IPI	UniProtKB:Q8TBK6	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SFMBT1	IPI	UniProtKB:Q96GD3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	Sfmbt1	IPI	UniProtKB:Q8BLB7	Mouse	MGI:MGI:7387162|PMID:30442713
Cellular Component	GO:0005654	nucleoplasm	SFMBT1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	SFMBT1	IDA		Human	PMID:17599839
Biological Process	GO:0045892	negative regulation of DNA-templated transcription	SFMBT1	IMP		Human	PMID:17599839
Biological Process	GO:0045892	negative regulation of DNA-templated transcription	SFMBT1	IMP		Human	PMID:23349461
Biological Process	GO:0045892	negative regulation of DNA-templated transcription	SFMBT1	IDA		Human	PMID:23592795
Biological Process	GO:0048635	negative regulation of muscle organ development	SFMBT1	IMP		Human	PMID:23349461

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern