Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SEC31A
  • Mouse genes Sec31a
  • Rat genes Sec31a
  • Zfish genes sec31a
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Sec31a

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0048306	calcium-dependent protein binding	SEC31A	IPI	UniProtKB:O75340	Human	PMID:16957052
Molecular Function	GO:0048306	calcium-dependent protein binding	SEC31A	IPI	UniProtKB:Q9H553	Human	PMID:17196169
Molecular Function	GO:0005515	protein binding	SEC31A	IPI	UniProtKB:P55735	Human	PMID:16957052
Molecular Function	GO:0005515	protein binding	SEC31A	IPI	UniProtKB:O75340	Human	PMID:17196169
Molecular Function	GO:0005515	protein binding	SEC31A	IPI	UniProtKB:Q9H553	Human	PMID:17196169
Molecular Function	GO:0005515	protein binding	SEC31A	IPI	UniProtKB:O75340	Human	PMID:17214967
Molecular Function	GO:0005515	protein binding	SEC31A	IPI	UniProtKB:P12815	Human	PMID:17214967
Molecular Function	GO:0005515	protein binding	SEC31A	IPI	UniProtKB:O75340	Human	PMID:18256029
Molecular Function	GO:0005515	protein binding	SEC31A	IPI	UniProtKB:Q6Y7W6	Human	PMID:20696395
Molecular Function	GO:0005515	protein binding	SEC31A	IPI	UniProtKB:Q04864	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SEC31A	IPI	UniProtKB:O75340	Human	PMID:25667979
Molecular Function	GO:0005515	protein binding	SEC31A	IPI	UniProtKB:O75340	Human	PMID:27716508
Cellular Component	GO:0030127	COPII vesicle coat	SEC31A	IDA		Human	PMID:17499046
Cellular Component	GO:0030127	COPII vesicle coat	SEC31A	IDA		Human	PMID:27716508
Cellular Component	GO:0030134	COPII-coated ER to Golgi transport vesicle	SEC31A	IDA		Human	PMID:22358839
Cellular Component	GO:0030134	COPII-coated ER to Golgi transport vesicle	SEC31A	IDA		Human	PMID:22802641
Cellular Component	GO:0030134	COPII-coated ER to Golgi transport vesicle	Sec31a	IDA		Mouse	PMID:24239381
Cellular Component	GO:0005737	cytoplasm	SEC31A	IDA		Human	PMID:17196169
Cellular Component	GO:0005829	cytosol	SEC31A	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005783	endoplasmic reticulum	SEC31A	IDA		Human	PMID:17196169
Cellular Component	GO:0070971	endoplasmic reticulum exit site	SEC31A	IMP		Human	PMID:16957052
Cellular Component	GO:0070971	endoplasmic reticulum exit site	SEC31A	IDA		Human	PMID:25201882
Cellular Component	GO:0070971	endoplasmic reticulum exit site	SEC31A	IDA		Human	PMID:28442536
Cellular Component	GO:0070971	endoplasmic reticulum exit site	Sec31a	IDA		Mouse	MGI:MGI:5608715|PMID:25201882
Cellular Component	GO:0070971	endoplasmic reticulum exit site	Sec31a	IDA		Mouse	PMID:21640725
Cellular Component	GO:0005768	endosome	Sec31a	IDA		Rat	PMID:7536673|RGD:634465
Cellular Component	GO:0043231	intracellular membrane-bounded organelle	SEC31A	IDA		Human	GO_REF:0000052
Cellular Component	GO:0048471	perinuclear region of cytoplasm	SEC31A	IDA		Human	PMID:17196169
Cellular Component	GO:0048471	perinuclear region of cytoplasm	SEC31A	IDA		Human	PMID:19401338
Cellular Component	GO:0030120	vesicle coat	SEC31A	IDA		Human	PMID:22792322
Biological Process	GO:0090110	COPII-coated vesicle cargo loading	SEC31A	IDA		Human	PMID:17499046
Biological Process	GO:0090110	COPII-coated vesicle cargo loading	SEC31A	IDA		Human	PMID:18843296
Biological Process	GO:0055123	digestive system development	sec31a	IMP	ZFIN:ZDB-MRPHLNO-120731-2	Zfish	PMID:22609279
Biological Process	GO:0007029	endoplasmic reticulum organization	sec31a	IMP	ZFIN:ZDB-MRPHLNO-120731-2	Zfish	PMID:22609279
Biological Process	GO:0001889	liver development	sec31a	IMP	ZFIN:ZDB-MRPHLNO-120731-2	Zfish	PMID:22609279
Biological Process	GO:0051592	response to calcium ion	SEC31A	IDA		Human	PMID:17196169

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern