Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SEC23B
  • Mouse genes Sec23b
  • Rat genes Sec23b
  • Zfish genes sec23b
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Sec23b

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	SEC23B	IPI	UniProtKB:O94855	Human	PMID:16189514
Molecular Function	GO:0005515	protein binding	SEC23B	IPI	UniProtKB:O43365	Human	PMID:21516116
Molecular Function	GO:0005515	protein binding	SEC23B	IPI	UniProtKB:O94855	Human	PMID:21516116
Molecular Function	GO:0005515	protein binding	SEC23B	IPI	UniProtKB:O43365	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SEC23B	IPI	UniProtKB:O94855	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SEC23B	IPI	UniProtKB:Q86UW9	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SEC23B	IPI	UniProtKB:Q8N205	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SEC23B	IPI	UniProtKB:Q8N684	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SEC23B	IPI	UniProtKB:Q969F0	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SEC23B	IPI	UniProtKB:Q96M27	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SEC23B	IPI	UniProtKB:Q9NR31	Human	PMID:26522472
Molecular Function	GO:0005515	protein binding	SEC23B	IPI	UniProtKB:Q5JRA6	Human	PMID:27551091
Molecular Function	GO:0005515	protein binding	SEC23B	IPI	UniProtKB:Q96PC5-7	Human	PMID:27551091
Molecular Function	GO:0005515	protein binding	SEC23B	IPI	UniProtKB:O94855	Human	PMID:31515488
Molecular Function	GO:0005515	protein binding	SEC23B	IPI	UniProtKB:O94855-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SEC23B	IPI	UniProtKB:P09234	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SEC23B	IPI	UniProtKB:Q13671	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SEC23B	IPI	UniProtKB:Q15436	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SEC23B	IPI	UniProtKB:P42858	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	Sec23b	IPI	UniProtKB:F6VJC5	Mouse	PMID:19966784
Cellular Component	GO:0012505	endomembrane system	SEC23B	IDA		Human	PMID:21364188
Cellular Component	GO:0005783	endoplasmic reticulum	SEC23B	IDA		Human	PMID:26522472
Cellular Component	GO:0048471	perinuclear region of cytoplasm	Sec23b	IDA		Mouse	PMID:15642376
Biological Process	GO:0051216	cartilage development	sec23b	IMP	ZFIN:ZDB-MRPHLNO-070108-3	Zfish	PMID:16980978
Biological Process	GO:0048702	embryonic neurocranium morphogenesis	sec23b	IMP	ZFIN:ZDB-MRPHLNO-070108-3	Zfish	PMID:16980978
Biological Process	GO:0048821	erythrocyte development	sec23b	IMP	ZFIN:ZDB-MRPHLNO-070108-3,ZFIN:ZDB-MRPHLNO-091217-3	Zfish	PMID:19561605

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern