Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SCML2
  • Mouse genes Scml2
  • Rat genes Scml2
  • Zfish genes scml2
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Scml2

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	SCML2	IPI	UniProtKB:P24941	Human	PMID:24358021
Molecular Function	GO:0005515	protein binding	SCML2	IPI	UniProtKB:A0A286YEY3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SCML2	IPI	UniProtKB:O43639	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SCML2	IPI	UniProtKB:P78317	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SCML2	IPI	UniProtKB:Q5VUG0	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SCML2	IPI	UniProtKB:Q8TBB1	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SCML2	IPI	UniProtKB:Q9H9S4	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	Scml2	IPI	PR:Q6A4J8	Mouse	PMID:25634095
Molecular Function	GO:0005515	protein binding	Scml2	IPI	PR:P27661	Mouse	PMID:25634095
Cellular Component	GO:0000785	chromatin	Scml2	IDA		Mouse	PMID:25634095
Cellular Component	GO:0005634	nucleus	SCML2	IDA		Human	PMID:21282530
Cellular Component	GO:0005634	nucleus	Scml2	IDA		Mouse	PMID:25634095
Cellular Component	GO:0031519	PcG protein complex	SCML2	IDA		Human	PMID:21282530
Cellular Component	GO:0001741	XY body	Scml2	IDA		Mouse	PMID:25634095
Biological Process	GO:0009653	anatomical structure morphogenesis	SCML2	IMP		Human	PMID:10331946
Biological Process	GO:0006915	apoptotic process	Scml2	IMP		Mouse	PMID:25634095
Biological Process	GO:0008104	protein localization	Scml2	IMP		Mouse	PMID:25634095
Biological Process	GO:0034502	protein localization to chromosome	Scml2	IMP		Mouse	PMID:25634095

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern