Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SCARF1
  • Mouse genes Scarf1
  • Rat genes Scarf1
  • Zfish genes scarf1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Scarf1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0030169	low-density lipoprotein particle binding	SCARF1	IDA		Human	PMID:9395444
Molecular Function	GO:0005515	protein binding	SCARF1	IPI	UniProtKB:A8MQ03	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SCARF1	IPI	UniProtKB:O14524-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SCARF1	IPI	UniProtKB:O60883	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SCARF1	IPI	UniProtKB:O75208	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SCARF1	IPI	UniProtKB:O95471	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SCARF1	IPI	UniProtKB:P22735	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SCARF1	IPI	UniProtKB:P48051	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SCARF1	IPI	UniProtKB:P48165	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SCARF1	IPI	UniProtKB:P60410	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SCARF1	IPI	UniProtKB:Q07627	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SCARF1	IPI	UniProtKB:Q5JX71	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SCARF1	IPI	UniProtKB:Q5T752	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SCARF1	IPI	UniProtKB:Q6FHY5	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SCARF1	IPI	UniProtKB:Q6L8G8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SCARF1	IPI	UniProtKB:Q6ZUX7	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SCARF1	IPI	UniProtKB:Q7Z5P4	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SCARF1	IPI	UniProtKB:Q8TBB6	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SCARF1	IPI	UniProtKB:Q8TED1	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SCARF1	IPI	UniProtKB:Q96BA8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SCARF1	IPI	UniProtKB:Q9HC36	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	Scarf1	IPI	PR:O88398	Mouse	PMID:15247299
Molecular Function	GO:0005044	scavenger receptor activity	SCARF1	IDA		Human	PMID:9395444
Cellular Component	GO:0016020	membrane	SCARF1	IDA		Human	PMID:9395444
Biological Process	GO:0016358	dendrite development	Scarf1	IDA		Mouse	PMID:15247299
Biological Process	GO:0016322	neuron remodeling	Scarf1	IMP		Mouse	MGI:MGI:3772611|PMID:18160648
Biological Process	GO:0048680	positive regulation of axon regeneration	Scarf1	IMP		Mouse	MGI:MGI:3772611|PMID:18160648
Biological Process	GO:0010976	positive regulation of neuron projection development	Scarf1	IDA		Mouse	MGI:MGI:3056881|PMID:15247299

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern