Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes RUBCN
  • Mouse genes Rubcn
  • Rat genes Rubcn
  • Zfish genes rubcn
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Rubcn

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	RUBCN	IPI	UniProtKB:Q14457	Human	PMID:19270696
Molecular Function	GO:0005515	protein binding	RUBCN	IPI	UniProtKB:Q8NEB9	Human	PMID:19270696
Molecular Function	GO:0005515	protein binding	RUBCN	IPI	UniProtKB:Q99570	Human	PMID:19270696
Molecular Function	GO:0005515	protein binding	RUBCN	IPI	UniProtKB:Q9P2Y5	Human	PMID:19270696
Molecular Function	GO:0005515	protein binding	RUBCN	IPI	UniProtKB:Q14457	Human	PMID:20562859
Molecular Function	GO:0005515	protein binding	RUBCN	IPI	UniProtKB:Q8NEB9	Human	PMID:20562859
Molecular Function	GO:0005515	protein binding	RUBCN	IPI	UniProtKB:Q9P2Y5	Human	PMID:20562859
Molecular Function	GO:0005515	protein binding	RUBCN	IPI	UniProtKB:Q14457	Human	PMID:21062745
Molecular Function	GO:0005515	protein binding	RUBCN	IPI	UniProtKB:Q8NEB9	Human	PMID:21062745
Molecular Function	GO:0005515	protein binding	RUBCN	IPI	UniProtKB:Q9P2Y5	Human	PMID:21062745
Molecular Function	GO:0005515	protein binding	RUBCN	IPI	UniProtKB:Q14457	Human	PMID:22493499
Molecular Function	GO:0005515	protein binding	RUBCN	IPI	UniProtKB:Q9P2Y5	Human	PMID:22493499
Molecular Function	GO:0005515	protein binding	RUBCN	IPI	UniProtKB:Q14457	Human	PMID:23954414
Molecular Function	GO:0005515	protein binding	RUBCN	IPI	UniProtKB:P00533	Human	PMID:24034250
Molecular Function	GO:0005515	protein binding	RUBCN	IPI	UniProtKB:Q14457	Human	PMID:24034250
Molecular Function	GO:0005515	protein binding	RUBCN	IPI	UniProtKB:P00533	Human	PMID:25594178
Molecular Function	GO:0005515	protein binding	RUBCN	IPI	UniProtKB:Q14457	Human	PMID:25594178
Molecular Function	GO:0005515	protein binding	RUBCN	IPI	UniProtKB:O95696	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RUBCN	IPI	UniProtKB:O95995	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RUBCN	IPI	UniProtKB:P15622-3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RUBCN	IPI	UniProtKB:Q13895	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RUBCN	IPI	UniProtKB:Q14119	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RUBCN	IPI	UniProtKB:Q3B820	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RUBCN	IPI	UniProtKB:Q5T619	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RUBCN	IPI	UniProtKB:Q8IZU0	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RUBCN	IPI	UniProtKB:Q8N8B7-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RUBCN	IPI	UniProtKB:Q92785	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RUBCN	IPI	UniProtKB:Q9H0I2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RUBCN	IPI	UniProtKB:Q9Y5B8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RUBCN	IPI	UniProtKB:X5D778	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RUBCN	IPI	UniProtKB:Q9P2Y5	Human	PMID:34386498
Molecular Function	GO:0005515	protein binding	Rubcn	IPI	UniProtKB:P00533	Mouse	MGI:MGI:5700284|PMID:25594178
Cellular Component	GO:0005829	cytosol	RUBCN	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005769	early endosome	RUBCN	IDA		Human	PMID:19270696
Cellular Component	GO:0043231	intracellular membrane-bounded organelle	RUBCN	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005770	late endosome	RUBCN	IDA		Human	PMID:19270696
Cellular Component	GO:0005654	nucleoplasm	RUBCN	IDA		Human	GO_REF:0000052
Biological Process	GO:1901097	negative regulation of autophagosome maturation	RUBCN	IMP		Human	PMID:21062745
Biological Process	GO:0010507	negative regulation of autophagy	RUBCN	IMP		Human	PMID:19270696
Biological Process	GO:0045806	negative regulation of endocytosis	RUBCN	IMP		Human	PMID:19270696
Biological Process	GO:0043553	negative regulation of phosphatidylinositol 3-kinase activity	RUBCN	IDA		Human	PMID:21062745

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern