Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes RSPH1
  • Mouse genes Rsph1
  • Rat genes Rsph1
  • Zfish genes rsph1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Rsph1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	RSPH1	IPI	UniProtKB:Q6PF18	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	RSPH1	IPI	UniProtKB:Q6PF18	Human	PMID:31515488
Molecular Function	GO:0005515	protein binding	RSPH1	IPI	UniProtKB:Q6PF18	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	Rsph1	IPI	UniProtKB:Q8CDR2	Mouse	MGI:MGI:6203178|PMID:30185526
Cellular Component	GO:0005929	cilium	Rsph1	IDA		Mouse	MGI:MGI:6404703|PMID:32203505
Cellular Component	GO:0000794	condensed nuclear chromosome	Rsph1	IDA		Mouse	PMID:9578619
Cellular Component	GO:0005737	cytoplasm	Rsph1	IDA		Mouse	PMID:9578619
Cellular Component	GO:0005829	cytosol	RSPH1	HDA		Human	PMID:16780588
Cellular Component	GO:0072687	meiotic spindle	Rsph1	IDA		Mouse	PMID:9578619
Cellular Component	GO:0031514	motile cilium	RSPH1	IDA		Human	PMID:23993197
Cellular Component	GO:0005634	nucleus	RSPH1	HDA		Human	PMID:16780588
Cellular Component	GO:0005634	nucleus	RSPH1	HDA		Human	PMID:21630459
Cellular Component	GO:0001520	outer dense fiber	Rsph1	IDA		Mouse	PMID:18453535
Cellular Component	GO:0036126	sperm flagellum	Rsph1	IDA		Mouse	PMID:18453535
Biological Process	GO:0035082	axoneme assembly	RSPH1	IMP		Human	PMID:23993197
Biological Process	GO:0007286	spermatid development	Rsph1	IMP	MGI:MGI:3807704	Mouse	PMID:18453535

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern