Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes RPS4X,RPS4Y1
  • Mouse genes Rps4x
  • Rat genes Rps4x
  • Zfish genes rps4x
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Rps4x

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	RPS4X	IPI	UniProtKB:P19712:PRO_0000038050	Human	PMID:24965446
Molecular Function	GO:0005515	protein binding	RPS4X	IPI	UniProtKB:G5E9A7	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	RPS4X	IPI	UniProtKB:P02545	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	RPS4X	IPI	UniProtKB:P06307	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	RPS4X	IPI	UniProtKB:P06396	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	RPS4X	IPI	UniProtKB:P22607	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	RPS4X	IPI	UniProtKB:P55212	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	RPS4X	IPI	UniProtKB:P62826	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	RPS4X	IPI	UniProtKB:Q00403	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	RPS4X	IPI	UniProtKB:Q01658	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	RPS4X	IPI	UniProtKB:Q14957	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	RPS4X	IPI	UniProtKB:Q7Z699	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	RPS4X	IPI	UniProtKB:Q9Y371	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	RPS4X	IPI	UniProtKB:Q9Y5Q9	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	RPS4X	IPI	UniProtKB:Q9Y649	Human	PMID:32814053
Molecular Function	GO:0003723	RNA binding	RPS4X	HDA		Human	PMID:22658674
Molecular Function	GO:0003723	RNA binding	RPS4X	HDA		Human	PMID:22681889
Molecular Function	GO:0003735	structural constituent of ribosome	RPS4Y1	IMP		Human	PMID:8358435
Molecular Function	GO:0003735	structural constituent of ribosome	RPS4X	HDA		Human	PMID:15883184
Molecular Function	GO:0003735	structural constituent of ribosome	RPS4X	IDA		Human	PMID:23636399
Molecular Function	GO:0003735	structural constituent of ribosome	RPS4X	IMP		Human	PMID:8358435
Molecular Function	GO:0003735	structural constituent of ribosome	Rps4x	IDA		Mouse	MGI:MGI:7432473|PMID:36517592
Cellular Component	GO:0036464	cytoplasmic ribonucleoprotein granule	RPS4X	IDA		Human	PMID:15121898
Cellular Component	GO:0022626	cytosolic ribosome	RPS4X	IDA		Human	PMID:23636399
Cellular Component	GO:0022627	cytosolic small ribosomal subunit	RPS4X	IDA		Human	PMID:8706699
Cellular Component	GO:0022627	cytosolic small ribosomal subunit	Rps4x	IDA		Mouse	MGI:MGI:7432473|PMID:36517592
Cellular Component	GO:0070062	extracellular exosome	RPS4X	HDA		Human	PMID:20458337
Cellular Component	GO:0005925	focal adhesion	RPS4X	HDA		Human	PMID:21423176
Cellular Component	GO:0016020	membrane	RPS4Y1	HDA		Human	PMID:19946888
Cellular Component	GO:0016020	membrane	RPS4X	HDA		Human	PMID:19946888
Cellular Component	GO:0005634	nucleus	RPS4Y1	HDA		Human	PMID:21630459
Cellular Component	GO:0005844	polysome	RPS4Y1	IDA		Human	PMID:8139551
Cellular Component	GO:0005844	polysome	RPS4X	IDA		Human	PMID:8139551
Cellular Component	GO:1990904	ribonucleoprotein complex	RPS4X	IDA		Human	PMID:17289661
Cellular Component	GO:0005840	ribosome	RPS4X	HDA		Human	PMID:15883184
Cellular Component	GO:0005840	ribosome	Rps4x	IDA		Rat	PMID:1448059|RGD:10769365
Cellular Component	GO:0015935	small ribosomal subunit	RPS4X	IDA		Human	PMID:8139551
Cellular Component	GO:0045202	synapse	Rps4x	IDA		Mouse	PMID:16635246
Cellular Component	GO:0045202	synapse	Rps4x	EXP		Mouse	PMID:16635246
Biological Process	GO:0007420	brain development	rps4x	IMP	ZFIN:ZDB-MRPHLNO-070326-3	Zfish	PMID:17183665
Biological Process	GO:0043009	chordate embryonic development	rps4x	IMP	ZFIN:ZDB-MRPHLNO-070326-3	Zfish	PMID:17183665
Biological Process	GO:0008284	positive regulation of cell population proliferation	RPS4X	IMP		Human	PMID:1795030
Biological Process	GO:0045727	positive regulation of translation	RPS4X	IMP		Human	PMID:1795030
Biological Process	GO:0045471	response to ethanol	Rps4x	IEP		Rat	PMID:1448059|RGD:10769365
Biological Process	GO:0006412	translation	RPS4Y1	IMP		Human	PMID:8358435
Biological Process	GO:0006412	translation	RPS4X	IMP		Human	PMID:8358435

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern